PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA07855.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family Trihelix
Protein Properties Length: 519aa    MW: 58955.6 Da    PI: 5.921
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA07855.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix94.41.1e-2958142187
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                 rW++qe+laL+++r++m+ ++r++ lk+plWeevs+k+++ g++r++k+Ckek+en+ k++k++keg++   +++ +t+++fdqlea
  OVA07855.1  58 RWPRQETLALLKIRSDMDVTFRDSTLKGPLWEEVSRKLADLGYHRNAKKCKEKFENVYKYHKRTKEGRST--KQDGKTYRFFDQLEA 142
                 8*******************************************************************98..577788*******85 PP
2trihelix1041.1e-32358442186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rW+k e+ aLi++r+++e +++++  k+plWee+s++m++ g++rs+k+Ckekwen+nk+ykk+ke++kkr +e+s+tcpyf+qle
  OVA07855.1 358 RWPKVEIEALIRMRTSLEVKYQDNGPKGPLWEEISAAMKKLGYNRSAKRCKEKWENINKYYKKVKESNKKR-PEDSKTCPYFEQLE 442
                 8*********************************************************************8.99***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 519 aa     Download sequence    
MSGLMSNSGG GGDVDRNHEG VVVGGVGSSM TGGGGLIGEE ESRRNHEEVG DRSSAGNRWP  60
RQETLALLKI RSDMDVTFRD STLKGPLWEE VSRKLADLGY HRNAKKCKEK FENVYKYHKR  120
TKEGRSTKQD GKTYRFFDQL EALDNQYPSL QSFSLPMKIE STPPPATTPA PPTNPIITSI  180
SQLPTSTVPS SLPNISTTSD FITTTSTSSS FSSAEESEGT PTQKKKRKLT TFFENLMKEV  240
IQKQEMLQKK FMEAIEKHEH QRMVREEQWK MQELVRINRE HDILVQERSI AAAKDAAVIA  300
FLQKISSSSS QQSNPNPVAQ FQENPLQLEK IEDNPPPRSD NNGDHENNFI PRSIGSSRWP  360
KVEIEALIRM RTSLEVKYQD NGPKGPLWEE ISAAMKKLGY NRSAKRCKEK WENINKYYKK  420
VKESNKKRPE DSKTCPYFEQ LEELYREKNN KRIINSSSSV VHPVYEQKQQ EEGPESLMED  480
QNNQDDQADE DHDAEEEDED GPAGGYEINV RNTSMVVVE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1224229KKKRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.11e-123Trihelix family protein