PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA07939.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Trihelix

Protein Properties

Length: 332aa MW: 38378.2 Da PI: 7.7396

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA07939.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	59.3	9.7e-19	50	132	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf...erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt+ e+ Lie++++++ +l+rg+lk+++Weev++ + ++ gf +++++qC++k+e+l+kry+ +k+++ st+ yfd ++ OVA07939.1 50 WTHLETVNLIEVYQNKWYSLKRGQLKANQWEEVAISVaARCGFdepSKTATQCRHKMEKLRKRYRSEKQRSTI------STWTYFDLMD 132 **********************************966668865579****************99885......69***998 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MAQPSSSSAP PPEPINQHEN ENGNGKNPSL QEPKPSPSIS PPKKIPPLPW THLETVNLIE 60 VYQNKWYSLK RGQLKANQWE EVAISVAARC GFDEPSKTAT QCRHKMEKLR KRYRSEKQRS 120 TISTWTYFDL MDQMERGPFP ISVRPIATID PNRHHQHHHQ RTSDSTDDDS DDVDDNVPDV 180 INKSRSINHI LRRPPIVSRI VDNSSSPRPQ WNGIGSSGPR DSDSRLLRNP MYRKRRRSFE 240 IEEEEEEEEK EEEEGGGGGE LLMELASVIR KFGEGFVKIE NMKMEMMKET EKHRMEMESK 300 RTKMILDSQH RIVDAIAKAF CSRKKIKESQ EM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	233	237	RKRRR
2	233	238	RKRRRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24860.1	3e-32	Trihelix family protein