PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA07960.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 520aa MW: 56837.1 Da PI: 6.4096

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA07960.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.4	0.00061	415	449	15	54
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ +++ L++l + +K + a++L +A+eYIk L OVA07960.1 415 KLGDRITALQQLCSPF-----GKTDTASVLYEAIEYIKFL 449 5556666666665555.....8****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MGDEYHSSSG ICSSTGMNWW NSSSGGGISS SSSSRNGLSS SSSPPCSTNT HISSTTTDNN 60 NNNIGGSSSS TYGWCNNNDH HQMMEMIKTK PNCDQQSSSS VSVSGSSSIV YQSSSDHAQR 120 PPDQAAAAGS DSIGGHEGSV LMDSNLQMMG FDLSSSPTTD WTQTLLRSSS GRAAETNFHS 180 MLQETSRLES DHGHHHIEED SSSIHAFNKQ MNQVFNLDPT QCFNSASKSS EDCTIVTCQG 240 LPMNNFSMNS SSATNYECAP SSTTLLHGLY EPADQQSSLN YSSYCMNSNE LISPSWSSKF 300 PQFLKTTTAP PTKEQTSHNQ LHFSNNAPFW NASSCGMMTD IRSSLFSSPR QQFLTPTLDH 360 DHQMRNCSNL TLKPNTEVRG SGSQVKKSST NEPAFKRPRI ETPSPLPTFK VRKEKLGDRI 420 TALQQLCSPF GKTDTASVLY EAIEYIKFLH DQVTALSNPY MKNGAPQQYQ QNLDKSKDGE 480 GLRQDLRSRG LCLVPISSTF TVTNETSTDF WTPTFGGTYR

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MGDEYHSSSG ICSSTGMNWW NSSSGGGISS SSSSRNGLSS SSSPPCSTNT HISSTTTDNN  60
NNNIGGSSSS TYGWCNNNDH HQMMEMIKTK PNCDQQSSSS VSVSGSSSIV YQSSSDHAQR  120
PPDQAAAAGS DSIGGHEGSV LMDSNLQMMG FDLSSSPTTD WTQTLLRSSS GRAAETNFHS  180
MLQETSRLES DHGHHHIEED SSSIHAFNKQ MNQVFNLDPT QCFNSASKSS EDCTIVTCQG  240
LPMNNFSMNS SSATNYECAP SSTTLLHGLY EPADQQSSLN YSSYCMNSNE LISPSWSSKF  300
PQFLKTTTAP PTKEQTSHNQ LHFSNNAPFW NASSCGMMTD IRSSLFSSPR QQFLTPTLDH  360
DHQMRNCSNL TLKPNTEVRG SGSQVKKSST NEPAFKRPRI ETPSPLPTFK VRKEKLGDRI  420
TALQQLCSPF GKTDTASVLY EAIEYIKFLH DQVTALSNPY MKNGAPQQYQ QNLDKSKDGE  480
GLRQDLRSRG LCLVPISSTF TVTNETSTDF WTPTFGGTYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	3e-66	bHLH family protein