PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA07982.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 355aa MW: 40373.9 Da PI: 5.4132

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA07982.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61	2.4e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G g+W+t ++ g+ R++k+c++rw +yl OVA07982.1 14 KGPWTPEEDQKLIDYIQKHGHGSWRTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.5	5.4e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ OVA07982.1 67 RGRFSFEEEETIIQLHSVLGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MGRAPCCDKN GLKKGPWTPE EDQKLIDYIQ KHGHGSWRTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHSPRL DLLDISSILS SSLYNSSQFN VSRLLGIQPL VNQPDLLRLA TTLLSSQREN 180 PDFLIPALQD QTQLNQFQFQ PNQLQNQIQE LPAACTTSTT PFSNETQFVQ ANVEQFQSNP 240 INFTCQNSQS NGWEENAIMP SNLMENFVPV PNYGYYSSDQ SSIIDPLSDN SNFQSNNSNQ 300 NISFTSVLST PSSSPTPLNS NSTYINSSTE DERDSYCSNV LKFEIPDFFD VNEFM

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MGRAPCCDKN GLKKGPWTPE EDQKLIDYIQ KHGHGSWRTL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHSPRL DLLDISSILS SSLYNSSQFN VSRLLGIQPL VNQPDLLRLA TTLLSSQREN  180
PDFLIPALQD QTQLNQFQFQ PNQLQNQIQE LPAACTTSTT PFSNETQFVQ ANVEQFQSNP  240
INFTCQNSQS NGWEENAIMP SNLMENFVPV PNYGYYSSDQ SSIIDPLSDN SNFQSNNSNQ  300
NISFTSVLST PSSSPTPLNS NSTYINSSTE DERDSYCSNV LKFEIPDFFD VNEFM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-105	MYB family protein