PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA08076.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MIKC_MADS
Protein Properties Length: 159aa    MW: 18242.5 Da    PI: 10.0823
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA08076.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF82.82.1e-26958150
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                krien   rqvtf+kRr g+lKKA+ELSvLCda++ +iifs++gklye s
  OVA08076.1  9 KRIENPVHRQVTFCKRRSGLLKKAKELSVLCDADIGIIIFSTHGKLYELS 58
                79*********************************************977 PP
2K-box48.83e-17861581385
       K-box  13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkek 85 
                 ++ ++++e+a +k+ei+ Lq+ +R + G + + +sl eL  Le++Le  +++iRs+K+++++++i+ l++k +
  OVA08076.1  86 QSLESEKEMAMMKQEIQLLQKGLRYMFGGGAGIMSLDELDGLEKHLELWIRNIRSTKMQIMFQEIQMLKNKVR 158
                 4557889**************************************************************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MARGKVQLKR IENPVHRQVT FCKRRSGLLK KAKELSVLCD ADIGIIIFST HGKLYELSTK  60
GSMQDVIERY MEASRGAQIA EGEPKQSLES EKEMAMMKQE IQLLQKGLRY MFGGGAGIMS  120
LDELDGLEKH LELWIRNIRS TKMQIMFQEI QMLKNKVRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71692.14e-62MIKC_MADS family protein