PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA08238.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Nin-like

Protein Properties

Length: 1019aa MW: 112024 Da PI: 5.1339

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA08238.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.9	4.6e-29	609	659	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ OVA08238.1 609 EKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 659 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1019 aa Download sequence
MSDPEDENPT TFVPKTNKSA VERDSLMDLD LDLDSSWPFD QNPFGPRPTS PFLLSIFASP 60 SHQNQPPILT TSCDQPSSPL WIFSDGDDEK FGGNGSSSFA GGLRFTDCPR FISRSPENVT 120 GNVVRNEDKK VCLPPSMGLV PMDNPDLPCM IKERMTQALR YFKESTEQTV LAQVWAPIKS 180 GDRYVLTTSG QPFVLDPHSN GLLQYRTVSL MYMFSVDGES DGDLGLPGRV FRQRLPEWTP 240 NVQYYSKNEY PRLNHALHYN VRGTLALPVF EPSGQSCVGV LELIMTSQKV NYAPEVDKVC 300 KALEAVNLKS SEILDNPNLQ ICNEGRQHAL AEILEILNVV CETYKLPLAQ TWVPCRHRSV 360 LANGGGVKKS CSSFDGSCVG QVCMSTTDVA FYVVDAHMWG FRDACAEHHL QKGQGVAGRA 420 FSSHSSCFSR DITQFSKTEY PLVHYALMFG LMSCYAICLR SSYTGSDDYI LEFFLPPSIT 480 DDSEQQDLLA SLLATMKEHF RSLRVASEQD LESEKRSIQI VEISTEEKLD SKLESRKIFP 540 GISPPGADGL PNGGGVMQLG SSNQKLMVEY DGLKHEENLA SVDGSHASVS LPDNKRTKKT 600 LERRRGKTEK SISLEVLQQY FAGSLKDAAK SLGVCPTTMK RICRQHGISR WPSRKINKVN 660 RSLSKLKRVI ESVEGAEGAF NLTSLSSSPL SVAVGSISWP VCLDGPKEQQ SPGSNSEFQG 720 RKELQSPTQM TLQSNVHGET GNQILDEGML LPRQEVIHDQ NGGSRSKFRK GSNGSKTGSG 780 SADGSTGNPT SHGSCQSSPA NEATPSNDLF VPSIQEQALN IGAPLDLVFQ QNGELNLTAA 840 YSIPDALIAT QQEPQQPLGG MLVEDAGSSK DLSNLCNLAV EGCLDEQVPD SSWIHPPILD 900 QTPQQDMAPP RTMPHVTATQ DVRTITIKAT YRDDIIRFRF LLTSGLVELK EEVAKRLKLE 960 VGTFDIKYLD DDQEWVVLAC DADLQECLEI SRLSGRHMIR LLVHDIIANL GSSCESSGE

Sequence ? help Back to Top

Protein Sequence Length: 1019 aa Download sequence

MSDPEDENPT TFVPKTNKSA VERDSLMDLD LDLDSSWPFD QNPFGPRPTS PFLLSIFASP  60
SHQNQPPILT TSCDQPSSPL WIFSDGDDEK FGGNGSSSFA GGLRFTDCPR FISRSPENVT  120
GNVVRNEDKK VCLPPSMGLV PMDNPDLPCM IKERMTQALR YFKESTEQTV LAQVWAPIKS  180
GDRYVLTTSG QPFVLDPHSN GLLQYRTVSL MYMFSVDGES DGDLGLPGRV FRQRLPEWTP  240
NVQYYSKNEY PRLNHALHYN VRGTLALPVF EPSGQSCVGV LELIMTSQKV NYAPEVDKVC  300
KALEAVNLKS SEILDNPNLQ ICNEGRQHAL AEILEILNVV CETYKLPLAQ TWVPCRHRSV  360
LANGGGVKKS CSSFDGSCVG QVCMSTTDVA FYVVDAHMWG FRDACAEHHL QKGQGVAGRA  420
FSSHSSCFSR DITQFSKTEY PLVHYALMFG LMSCYAICLR SSYTGSDDYI LEFFLPPSIT  480
DDSEQQDLLA SLLATMKEHF RSLRVASEQD LESEKRSIQI VEISTEEKLD SKLESRKIFP  540
GISPPGADGL PNGGGVMQLG SSNQKLMVEY DGLKHEENLA SVDGSHASVS LPDNKRTKKT  600
LERRRGKTEK SISLEVLQQY FAGSLKDAAK SLGVCPTTMK RICRQHGISR WPSRKINKVN  660
RSLSKLKRVI ESVEGAEGAF NLTSLSSSPL SVAVGSISWP VCLDGPKEQQ SPGSNSEFQG  720
RKELQSPTQM TLQSNVHGET GNQILDEGML LPRQEVIHDQ NGGSRSKFRK GSNGSKTGSG  780
SADGSTGNPT SHGSCQSSPA NEATPSNDLF VPSIQEQALN IGAPLDLVFQ QNGELNLTAA  840
YSIPDALIAT QQEPQQPLGG MLVEDAGSSK DLSNLCNLAV EGCLDEQVPD SSWIHPPILD  900
QTPQQDMAPP RTMPHVTATQ DVRTITIKAT YRDDIIRFRF LLTSGLVELK EEVAKRLKLE  960
VGTFDIKYLD DDQEWVVLAC DADLQECLEI SRLSGRHMIR LLVHDIIANL GSSCESSGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein