PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA08239.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

LBD

Protein Properties

Length: 176aa MW: 20499.4 Da PI: 4.8925

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA08239.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	132	2.5e-41	14	112	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaC++lrrkC+++C lapyfpa+++++fa vhk+FGasnv+k+l+ ++e++reda++s+vyeA ar+r+PvyG++g i++lqq+++ l+ +l+l+k+ OVA08239.1 14 PCAACRMLRRKCVDNCLLAPYFPADEAENFADVHKVFGASNVTKMLQMVEETKREDAVKSMVYEATARLRNPVYGSAGAIFHLQQHVQDLAMQLELTKT 112 7*********************************************************************************************99886 PP

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence
MDLHMRTQGK INQPCAACRM LRRKCVDNCL LAPYFPADEA ENFADVHKVF GASNVTKMLQ 60 MVEETKREDA VKSMVYEATA RLRNPVYGSA GAIFHLQQHV QDLAMQLELT KTRVHEEQEQ 120 RDQLLGILMN VHQLNQIPTF DDPMFEFNEY LLDDYAICYD AIDFSTEFDW ILQKKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28500.1	1e-44	LBD family protein