PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA08304.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Trihelix

Protein Properties

Length: 538aa MW: 60411.8 Da PI: 7.8414

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA08304.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	45.8	1.6e-14	239	326	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf...erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +Li+a e+ +l+rg+lk+++W++v++ + +++ + +++ +qCk++++ l+k+yk +k+ +++ s++ +f++l+ OVA08304.1 239 CWSEGATSTLIDAWGERYLELSRGNLKQKHWKDVADIVsSREDYtkpSKTDVQCKNRIDTLKKKYKIEKAKIASGS--GPSKWNFFNRLD 326 7***********************************84444422267999******************85..4447****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MRNLISSHYV MFQKHHPFST TVVNDVREEG NGREEKVSVT FVDKDGEEKH IKVPIGMSML 60 EAAHENDIEL EGACEGSIAC STCHVIVTDM GYYNKLEDPT DEENDMLDLA FGLTETSRLG 120 CQVIAKPELD GLRLVLPSAT RNFAVDGLVI QHRITNCLLA CLLACSSSTQ TDHARVWIIS 180 GFFSLSHGMG KERKGKEMKG NTCGVHACMH ACIDRSALPC PALPCPALPT ASGGGREDCW 240 SEGATSTLID AWGERYLELS RGNLKQKHWK DVADIVSSRE DYTKPSKTDV QCKNRIDTLK 300 KKYKIEKAKI ASGSGPSKWN FFNRLDHLIG PNSKIPAMPT TPTQGGKVPV AIPVGLRSFH 360 QEQNQNQNPN PNQNQQQRRP QRHNKSSRYR TMDSDSSKSE PADSPDSTDS FPPETTFTRK 420 RPRFEREPPN SEPVRPASFR QNTGKGNNWG NSIMELTRAI LKFGEAYEQV ETSKLQQVVD 480 MEQQRMEFTK ELELQRMQFF MKTQLELSQM KHGRRAGNSR RHNNNNNNNN NNSDDNSG

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MRNLISSHYV MFQKHHPFST TVVNDVREEG NGREEKVSVT FVDKDGEEKH IKVPIGMSML  60
EAAHENDIEL EGACEGSIAC STCHVIVTDM GYYNKLEDPT DEENDMLDLA FGLTETSRLG  120
CQVIAKPELD GLRLVLPSAT RNFAVDGLVI QHRITNCLLA CLLACSSSTQ TDHARVWIIS  180
GFFSLSHGMG KERKGKEMKG NTCGVHACMH ACIDRSALPC PALPCPALPT ASGGGREDCW  240
SEGATSTLID AWGERYLELS RGNLKQKHWK DVADIVSSRE DYTKPSKTDV QCKNRIDTLK  300
KKYKIEKAKI ASGSGPSKWN FFNRLDHLIG PNSKIPAMPT TPTQGGKVPV AIPVGLRSFH  360
QEQNQNQNPN PNQNQQQRRP QRHNKSSRYR TMDSDSSKSE PADSPDSTDS FPPETTFTRK  420
RPRFEREPPN SEPVRPASFR QNTGKGNNWG NSIMELTRAI LKFGEAYEQV ETSKLQQVVD  480
MEQQRMEFTK ELELQRMQFF MKTQLELSQM KHGRRAGNSR RHNNNNNNNN NNSDDNSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14180.1	1e-69	Trihelix family protein