PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA08358.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

GRF

Protein Properties

Length: 373aa MW: 42829.3 Da PI: 8.5667

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA08358.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.6	6.1e-25	75	118	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++ +++k+CE+H+hrgr+rsrk++e OVA08358.1 75 DPEPGRCRRTDGKKWRCSKEAFPDSKYCEKHMHRGRNRSRKPVE 118 79***************************************987 PP
2	QLQ	61	3.3e-21	9	44	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTa+Q+q+L++Q+l++K++++n+P+PpeLl+++++ OVA08358.1 9 PFTATQWQELENQALIFKHMVSNVPIPPELLFPLKR 44 9********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MMNARNKPPF TATQWQELEN QALIFKHMVS NVPIPPELLF PLKRSWDSSD SSKLFPHNQS 60 MGWGCFHMGL GRKIDPEPGR CRRTDGKKWR CSKEAFPDSK YCEKHMHRGR NRSRKPVEVI 120 TTTQSKPMSS FNTNTTTTTT NTNPSFSLSS SMNNTETHHH NHPYYNASLP SFLYPHSSSS 180 RPPGFGFSPQ TNTTHFVSDS GSYSQAENDY RSVQGLKEGL DERSFFSEPS GSLRNVPDLS 240 LDNSWKFTPL RMSSSSSFTQ PKENNNCYSA LQNGYSQQQY SDISGQQNKH QQEQHCFVLG 300 TDFKSERPVK VDKQEEPQQP LRHFFDEWPL KSRESWMNME EERLNRASFS TTQLSISIPE 360 PSSDFAVSSY SKW

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MMNARNKPPF TATQWQELEN QALIFKHMVS NVPIPPELLF PLKRSWDSSD SSKLFPHNQS  60
MGWGCFHMGL GRKIDPEPGR CRRTDGKKWR CSKEAFPDSK YCEKHMHRGR NRSRKPVEVI  120
TTTQSKPMSS FNTNTTTTTT NTNPSFSLSS SMNNTETHHH NHPYYNASLP SFLYPHSSSS  180
RPPGFGFSPQ TNTTHFVSDS GSYSQAENDY RSVQGLKEGL DERSFFSEPS GSLRNVPDLS  240
LDNSWKFTPL RMSSSSSFTQ PKENNNCYSA LQNGYSQQQY SDISGQQNKH QQEQHCFVLG  300
TDFKSERPVK VDKQEEPQQP LRHFFDEWPL KSRESWMNME EERLNRASFS TTQLSISIPE  360
PSSDFAVSSY SKW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	5e-59	GRF family protein