PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA08362.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB
Protein Properties Length: 269aa    MW: 31113.1 Da    PI: 6.9838
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA08362.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding476.1e-151663148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT  Ed++l d++k +G g+W++ +++ g++R+ k+c++rw++yl
       OVA08362.1 16 RGAWTDFEDKILTDYIKIHGEGRWRKLPQRAGLKRCCKSCRLRWLNYL 63
                     89********************************************97 PP
2Myb_DNA-binding50.93.5e-1669113147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+ +++E++l+++++k+lG++ W++Ia +++ gRt++++k++w++ 
       OVA08362.1  69 RGNISADEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTT 113
                      7899******************.*********.************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MVGGSSNCCS KEGLHRGAWT DFEDKILTDY IKIHGEGRWR KLPQRAGLKR CCKSCRLRWL  60
NYLKPEIKRG NISADEEDLI IRLHKLLGNR WSLIAGRLPG RTDNEIKNYW NTTLEKKVQC  120
RSGSNSTSIS NLTCKHSNNK PKKKKKLTNS PSSRETPTLS AIIIKPADMV HESELSESIR  180
CNPVVQVQEP YKVEPHDDMN NITIENQTEV EPVLSIVREE ENNWFDFMMD LNIGELYKYD  240
LPDFNFSDHH DQFHDLDNLT WIEADNNAN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141147PKKKKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.18e-58MYB family protein