PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA08380.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family NF-YA
Protein Properties Length: 339aa    MW: 37082.1 Da    PI: 9.0275
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA08380.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.86.5e-32175231158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 dep+YVN+KQy++Il+RRq+Rakle+++kl  k+rkpylheSRh hA++R RgsgGrF
  OVA08380.1 175 DEPIYVNPKQYRGILRRRQSRAKLEAQNKL-LKARKPYLHESRHLHAIKRVRGSGGRF 231
                 79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MHNIQQKETD QISGQSTSPY VVNCPSWWKS SGSQISQSSL SRSVGLNVDT PPQHCQNMKQ  60
LGFQLQDQES SSSQSTGQSN HEVATMGGGN PHGYDETNGR RVEGHNKSFS SQGTRDFGLP  120
PSQVDYNQSV AHFPYPYADP YVGGFLAAYG TPTIIHPHMV GMPTRVPLPL DLAGDEPIYV  180
NPKQYRGILR RRQSRAKLEA QNKLLKARKP YLHESRHLHA IKRVRGSGGR FLNTKELQQL  240
ELSSPTDIQN VSESSAFPQT GKYLSESEVL QSDTGNAGAS TTSCSDITSV SNSEGNLRPP  300
DPRLLSRYPP PQIVGTSTVQ GGGGIMCNGY QQSRVSIIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.19e-50NF-YA family protein