PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA08404.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB_related
Protein Properties Length: 276aa    MW: 30401.4 Da    PI: 9.5575
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA08404.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.33e-12555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT eE+e l  +v+++G+g Wk I +          R+  ++k++w++
       OVA08404.1  5 KQKWTSEEEEALRAGVAKHGTGKWKNIQKDPEfghclAARSNIDLKDKWRN 55
                     79****************************9999***99**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MGAPKQKWTS EEEEALRAGV AKHGTGKWKN IQKDPEFGHC LAARSNIDLK DKWRNMSVSA  60
SGQGSRDKLR TPKLKSLPAP TSSTFQAPSS TQAAEDASTD TVMDSSKNVP EGKPAPRYNT  120
MIYDAISTMK DPNGSEIGAI NSFIEQRHEV PQNFRRLLSS KLRRLVAQGK LEKVQNCYKI  180
KKDSIFGTRT PTSKQKDLRP KQSQNSGFAT SVDTVEEAAI TAAYKIADAE NKSFVASEAV  240
KEAERVAKMA EETDCLLQLA KEIFEQCSRG EIVVMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.17e-72MYB_related family protein