PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA08501.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C3H
Protein Properties Length: 326aa    MW: 37089.6 Da    PI: 7.9747
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA08501.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.42.1e-07133152626
                 -SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   6 CrffartGtCkyGdrCkFaHg 26 
                 C +f++ G+Ck Gd+C +aHg
  OVA08501.1 133 CTDFRK-GYCKKGDSCEYAHG 152
                 99****.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MLMIGEGNRS NRTVHISPWC HFDNSTAQMI FPLPVSCVSV RERKSEYSPS LLTEVLTALH  60
RYDQTDTNSD FSGYDSYVSP VTYSCDEFRM YDFKVRRCTR DGPHEWVECP YAHPGEKASR  120
RDPLKFNYGA TGCTDFRKGY CKKGDSCEYA HGVFESWLHP DRYRTQPCKD GTDCRRRVCF  180
FAHTAEQLRV VTQQSPRTRP TPPLKTESPR SSYDGSPIRH GLDSYFMKGL SPTSNLMSSS  240
PPPSPPSGFC SPIGGLTRRS VFNNLPSTPT RSGCLDFWDI GFEEDRAMNK VESGREVRVK  300
LFTKLSEQNS FERVDSFTPV PDVGWV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.11e-80C3H family protein