PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA08508.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 459aa MW: 51120.4 Da PI: 5.9699

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA08508.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	23.9	7.7e-08	370	410	9	54
HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P + K++ a++L +A +Y+k L OVA08508.1 370 ARQRRERISERIRVLQKLVPGgN------KMDTASMLDEAANYLKFL 410 69****************955......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MSSHHVDQRH EMESSLADYY RNTIIGGKMD LAEDLFGPSP TMLRGIKTCN STRSNSDKVI 60 SRQMQQQLAI TSFDSIDVAS NLDLLQRQAE AERWFGAGSY SNSQQINIRP YSTMNQQPVG 120 DLMLADYGSS SAHDRLQFGN NGVKESTIGF SAGSADQSLE CLLSSTTNSN TDASVDDDDD 180 GISLIFSDCR NLWNYYSSGN AVSSGESENN SSIKEANNGE IISQASSNPC MDNHSRSLET 240 RPNYNSSKRS NKEQQEQKAS MNSRSFEILQ SDSSTHEEGG FRLITDNNNS LKSKKPRLEK 300 HQRTSNINFQ NPNSSSVSEF DEPDTEAIAY MKEMIYRAAA FRPVNLGLEL VEKPKRKNVR 360 ISSDPQTVAA RQRRERISER IRVLQKLVPG GNKMDTASML DEAANYLKFL RSQVKALETL 420 GNNKLDSVSC TSTNFPLSSP PPFNQNLPMQ NFFPSFPKP

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MSSHHVDQRH EMESSLADYY RNTIIGGKMD LAEDLFGPSP TMLRGIKTCN STRSNSDKVI  60
SRQMQQQLAI TSFDSIDVAS NLDLLQRQAE AERWFGAGSY SNSQQINIRP YSTMNQQPVG  120
DLMLADYGSS SAHDRLQFGN NGVKESTIGF SAGSADQSLE CLLSSTTNSN TDASVDDDDD  180
GISLIFSDCR NLWNYYSSGN AVSSGESENN SSIKEANNGE IISQASSNPC MDNHSRSLET  240
RPNYNSSKRS NKEQQEQKAS MNSRSFEILQ SDSSTHEEGG FRLITDNNNS LKSKKPRLEK  300
HQRTSNINFQ NPNSSSVSEF DEPDTEAIAY MKEMIYRAAA FRPVNLGLEL VEKPKRKNVR  360
ISSDPQTVAA RQRRERISER IRVLQKLVPG GNKMDTASML DEAANYLKFL RSQVKALETL  420
GNNKLDSVSC TSTNFPLSSP PPFNQNLPMQ NFFPSFPKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	371	376	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	2e-60	bHLH family protein