PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA08543.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB_related
Protein Properties Length: 354aa    MW: 38353.8 Da    PI: 7.8169
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA08543.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.76.5e-14100144347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++lG+g+W+ Iar +   Rt+ q+ s+ qky
       OVA08543.1 100 PWTEEEHRLFLMGLQKLGKGDWRGIARNFVVSRTPTQVASHAQKY 144
                      7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MTRRCSHCSN NGHNSRTCPT RGGVKLFGVR LTDGSIKKSA SMGNLSSHYY SSSSAAASPN  60
PSSPDHLRDP NPIAEGYVSD DPAHTSCSSN CRGERKKGIP WTEEEHRLFL MGLQKLGKGD  120
WRGIARNFVV SRTPTQVASH AQKYFIRQSN ATRRKRRSSL FDMVPDLSME PPAVPEEQFL  180
FQSELGETEH MNSLPSLNLS LDRECDHMET TCNETPTSAE AVEETVTCSN FAPIPVFFPT  240
YLPLPFPFWQ PNLGSSSGGE EKGGGGETTS NHQVLKPTPV LSKDTRVNVD ELLGMSKLTL  300
GGGGGGGAGT RIEPSPLSIE LLGAPSRQSA FHVNQPVSRS DLSKSNKSNA IHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.15e-87MYB_related family protein