PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA08738.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB_related

Protein Properties

Length: 803aa MW: 88945.6 Da PI: 4.5442

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA08738.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	37.3	6.2e-12	628	671	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 + rWT+++ el++++++q+G++ ++ I + ++ gRt+ q+k+++ k OVA08738.1 628 KERWTKQDTELFYQGIRQFGTD-FAMIQQLFP-GRTRHQVKLKYKK 671 689*****************.*****.*********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 803 aa Download sequence
MAFEMDPFAD LLCEPVPVNA RAGAKFQPKA RPRCKKEVPV LVSSSLSDST KEKQVTTDSR 60 HVDTSKAVSP SVDCAEIGST HIALSSVDTS KERPCSSTLD GSSSHLVTQG PVNSTAALHS 120 EFSISDGDRS SGPMDISPQF VRKGDVGSTK PLFSEDSKTF NIQGDKQAGF GGSRGETADI 180 FSDLESLDDI LSQPAISNVS TVRKFQPKVK VNGQLRNKLP ISRPVTSDAD CSISIPEAPG 240 LHAPKDLEEG PSPPILPSVD STFRASSSAP ANSNPDFLAS QELLSNRETA ASGNHGDLLM 300 DDGRLEREEE AFHGLQSVDV ISQATTTTGD AHLVPPETEF LEDLTPAYPP DSFIDFSTMG 360 FSDSLPRDLP PELQATEELE NLADASGTKI FNPGEFVDSQ AVRVTSGKKD ERSVLTASEG 420 NETGKSLRQL RKRLTAPVAA DEMATETQEN QDMLSEPSNN SLADEGENND DDDEYRGEET 480 SNRKRARKLS KKPVVGNEKT VRRRKKTSEG SDSLDKEPPK KKFSHSTRRN RRRVDKVLLE 540 TPDEEIDPQK LIIKDLILLA EAKERLLIKD ANVSKNSFAN QSNSFTQDAP YNEEDPFGST 600 QDDDQPAPSA QHSSFKLNYH SFMDRTPKER WTKQDTELFY QGIRQFGTDF AMIQQLFPGR 660 TRHQVKLKYK KEERQQPMRL SDALTNRSKD HSHFELVIER LQKAAAEAEQ NSNRDEESIG 720 LTGEEEEVTP ETNEEVTKAE DEGGAKTERK EEEEVGEADM EAEEEVVNTN QAYSPTVKSH 780 HCEIEEEDVY DRWSQYKSDY DVF

Sequence ? help Back to Top

Protein Sequence Length: 803 aa Download sequence

MAFEMDPFAD LLCEPVPVNA RAGAKFQPKA RPRCKKEVPV LVSSSLSDST KEKQVTTDSR  60
HVDTSKAVSP SVDCAEIGST HIALSSVDTS KERPCSSTLD GSSSHLVTQG PVNSTAALHS  120
EFSISDGDRS SGPMDISPQF VRKGDVGSTK PLFSEDSKTF NIQGDKQAGF GGSRGETADI  180
FSDLESLDDI LSQPAISNVS TVRKFQPKVK VNGQLRNKLP ISRPVTSDAD CSISIPEAPG  240
LHAPKDLEEG PSPPILPSVD STFRASSSAP ANSNPDFLAS QELLSNRETA ASGNHGDLLM  300
DDGRLEREEE AFHGLQSVDV ISQATTTTGD AHLVPPETEF LEDLTPAYPP DSFIDFSTMG  360
FSDSLPRDLP PELQATEELE NLADASGTKI FNPGEFVDSQ AVRVTSGKKD ERSVLTASEG  420
NETGKSLRQL RKRLTAPVAA DEMATETQEN QDMLSEPSNN SLADEGENND DDDEYRGEET  480
SNRKRARKLS KKPVVGNEKT VRRRKKTSEG SDSLDKEPPK KKFSHSTRRN RRRVDKVLLE  540
TPDEEIDPQK LIIKDLILLA EAKERLLIKD ANVSKNSFAN QSNSFTQDAP YNEEDPFGST  600
QDDDQPAPSA QHSSFKLNYH SFMDRTPKER WTKQDTELFY QGIRQFGTDF AMIQQLFPGR  660
TRHQVKLKYK KEERQQPMRL SDALTNRSKD HSHFELVIER LQKAAAEAEQ NSNRDEESIG  720
LTGEEEEVTP ETNEEVTKAE DEGGAKTERK EEEEVGEADM EAEEEVVNTN QAYSPTVKSH  780
HCEIEEEDVY DRWSQYKSDY DVF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	483	505	RKRARKLSKKPVVGNEKTVRRRK
2	499	505	KTVRRRK
3	528	533	RRNRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	7e-46	MYB_related family protein