PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA08890.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family BBR-BPC
Protein Properties Length: 277aa    MW: 31392 Da    PI: 10.0892
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA08890.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind3313.4e-101127726301
   GAGA_bind  26 lqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla.....salpvgvqvlsgtksidslqqlse.pq 118
                 ++ ms++a+rd+ i+ernlalsekkaa+aerdma lqrd+a+++rn a++e+dn+l+ l+++ ns++      + p g+ v   tk++++ q++++ p+
  OVA08890.1   1 MKFMSILADRDTLIQERNLALSEKKAALAERDMAILQRDQAISQRNSAMMEQDNALAVLEYRGNSSVnsnsaPTYPLGCPVPCRTKHMHHQQHMHHsPH 99 
                 579************************************************************99887765556788999999******99997777** PP

   GAGA_bind 119 ledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesad.erskaekksidlvlngvslDestlPvPvCsCt 216
                 +++  ++ +e++++ea pi++   + ++++k++   r++++ke+ka + +k+  k+ k  k+  +d +    +++  dl+ln+v +D s++P PvCsCt
  OVA08890.1 100 MAEVHYNSKEMHTNEAIPISS---VCSKSPKPR---RGRRTKEHKAISSNKRALKPMKVGKRGCNDlNMCSDPWRGHDLSLNHVYFDYSNMPRPVCSCT 192
                 ******************988...445555555...4555555566655665555555555555555667899************************** PP

   GAGA_bind 217 GalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                 G+l+qCYkWG GGWqS+CCt t+S+yPLPv++++r++R++grKmS++af+klL+ L aeG+dls+p+DLkdhW +HGtn+++ti+
  OVA08890.1 193 GVLQQCYKWGKGGWQSSCCTSTLSMYPLPVVPNKRHSRLGGRKMSGSAFNKLLSWLLAEGHDLSTPLDLKDHWSRHGTNRYITIK 277
                 ************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MKFMSILADR DTLIQERNLA LSEKKAALAE RDMAILQRDQ AISQRNSAMM EQDNALAVLE  60
YRGNSSVNSN SAPTYPLGCP VPCRTKHMHH QQHMHHSPHM AEVHYNSKEM HTNEAIPISS  120
VCSKSPKPRR GRRTKEHKAI SSNKRALKPM KVGKRGCNDL NMCSDPWRGH DLSLNHVYFD  180
YSNMPRPVCS CTGVLQQCYK WGKGGWQSSC CTSTLSMYPL PVVPNKRHSR LGGRKMSGSA  240
FNKLLSWLLA EGHDLSTPLD LKDHWSRHGT NRYITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.22e-91BBR-BPC family protein