PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA08981.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 373aa MW: 41920.1 Da PI: 6.3214

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA08981.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.5	2.3e-16	82	127	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ OVA08981.1 82 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 127 899***************************.*********996 PP
2	Myb_DNA-binding	52.7	9.6e-17	134	177	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l a++ +G++ W+ Iar ++ gRt++ +k++w+ OVA08981.1 134 RRAFSEEEEEKLMSAHRVYGNK-WAMIARLFP-GRTDNAVKNHWHV 177 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MSSEMGSKKI CWEFPFMTNC SSSLEDHHNE GFDGKGSDSS DGFEGNNAAM EDNSNNLNEE 60 NPNESSVNGK EIDCGQSKLC ARGHWRPAED SKLKELVALY GPQNWNLIAE KLEGRSGKSC 120 RLRWFNQLDP RINRRAFSEE EEEKLMSAHR VYGNKWAMIA RLFPGRTDNA VKNHWHVIMA 180 RKYREQSNAY RRRKLSQSVH RKFEEGSSLI TEQSSFNLCN GSFISNLSPY PFAAPINGED 240 SIPSGGNVFL GSSNSNKIPP QSGVCAEQTP FDLFSGPRNQ DFTSFLSHSS WERPRDDSSF 300 TGFYHHQQQQ IPQIMAMQQS NHYHPSYFSN STTSTSQVSD IEASPSVAEN RGVSHFETTI 360 SPPFIDFLGV GAT

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MSSEMGSKKI CWEFPFMTNC SSSLEDHHNE GFDGKGSDSS DGFEGNNAAM EDNSNNLNEE  60
NPNESSVNGK EIDCGQSKLC ARGHWRPAED SKLKELVALY GPQNWNLIAE KLEGRSGKSC  120
RLRWFNQLDP RINRRAFSEE EEEKLMSAHR VYGNKWAMIA RLFPGRTDNA VKNHWHVIMA  180
RKYREQSNAY RRRKLSQSVH RKFEEGSSLI TEQSSFNLCN GSFISNLSPY PFAAPINGED  240
SIPSGGNVFL GSSNSNKIPP QSGVCAEQTP FDLFSGPRNQ DFTSFLSHSS WERPRDDSSF  300
TGFYHHQQQQ IPQIMAMQQS NHYHPSYFSN STTSTSQVSD IEASPSVAEN RGVSHFETTI  360
SPPFIDFLGV GAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	2e-75	MYB family protein