PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA09007.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 364aa MW: 40553.8 Da PI: 6.3471

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA09007.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.5	1.3e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd llv +++++G+g+W++++ g++R+ k+c++rw +yl OVA09007.1 14 KGPWTPEEDILLVTYIQEHGPGNWRAVPTNTGLHRCSKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	45.7	1.5e-14	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +T E+ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l OVA09007.1 67 RGEFTDHEESMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112 899*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MGRPPCCDKI GMKKGPWTPE EDILLVTYIQ EHGPGNWRAV PTNTGLHRCS KSCRLRWTNY 60 LRPGIKRGEF TDHEESMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLKKAQ 120 NVDDENTSRD GLSSNLQPAA ISKGQWERRL QTDVGMARQA LYEALSVDTK PALPIDNLNN 180 SSTSCSTELL KSSSSNGFDN PYNMSQIQPT TSYVSNTENI SRWLQGWKNN NSSSVKHARS 240 SSESSTQNSF INNTTATATT TDYSSSEGGG THNNHEILSP EALESLFSFD SSSTTTPDVS 300 QSDQSTNLVT GNSCFFKSKP NLESTQVPFS LLEKWLLFDE GTTMNLHGQE DHMNIDQAAA 360 DLFC

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MGRPPCCDKI GMKKGPWTPE EDILLVTYIQ EHGPGNWRAV PTNTGLHRCS KSCRLRWTNY  60
LRPGIKRGEF TDHEESMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLKKAQ  120
NVDDENTSRD GLSSNLQPAA ISKGQWERRL QTDVGMARQA LYEALSVDTK PALPIDNLNN  180
SSTSCSTELL KSSSSNGFDN PYNMSQIQPT TSYVSNTENI SRWLQGWKNN NSSSVKHARS  240
SSESSTQNSF INNTTATATT TDYSSSEGGG THNNHEILSP EALESLFSFD SSSTTTPDVS  300
QSDQSTNLVT GNSCFFKSKP NLESTQVPFS LLEKWLLFDE GTTMNLHGQE DHMNIDQAAA  360
DLFC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47600.1	4e-99	MYB family protein