PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA09079.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

HD-ZIP

Protein Properties

Length: 342aa MW: 39403.7 Da PI: 4.6489

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA09079.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.8	2.2e-19	85	138	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t++q+e Le+ Fe ++++ e++ +LAk lgL rqV +WFqNrRa++k OVA09079.1 85 KKRRLTTNQVEFLERNFEVDNKLEPERKIQLAKDLGLHPRQVAIWFQNRRARWK 138 56689************************************************9 PP
2	HD-ZIP_I/II	125.1	3.1e-40	84	174	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+++qv++LE++Fe ++kLeperK +la++Lgl+prqva+WFqnrRAR+ktkqlEkdye+Lk++y +l+ + ++L ke+e+L++e+ OVA09079.1 84 EKKRRLTTNQVEFLERNFEVDNKLEPERKIQLAKDLGLHPRQVAIWFQNRRARWKTKQLEKDYETLKASYHSLQINYDNLLKEKEKLENEV 174 69*************************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MACRSIYGGS NQTLVRQNEG ICSSATLEAL LISNSSPSFL GSRSMVNFED VHGRKTSEGS 60 SLYRRFDEEE NCNEDLGECF YQPEKKRRLT TNQVEFLERN FEVDNKLEPE RKIQLAKDLG 120 LHPRQVAIWF QNRRARWKTK QLEKDYETLK ASYHSLQINY DNLLKEKEKL ENEVVILTDK 180 VLLKEKERQN SESTEPNKPS HLQTQELALN LGSSEEESDV PILGYKQEDL SSVNSVVFDS 240 DSLHCIDGVH SSKLEPADSS HVFEPELSEH SKDDDENLSK NLWPPVCHLP KLEAEVENLS 300 KNILHQVSQL PKLEDIDYEY PSENSCNYGV QTIDQSLWFW SF

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MACRSIYGGS NQTLVRQNEG ICSSATLEAL LISNSSPSFL GSRSMVNFED VHGRKTSEGS  60
SLYRRFDEEE NCNEDLGECF YQPEKKRRLT TNQVEFLERN FEVDNKLEPE RKIQLAKDLG  120
LHPRQVAIWF QNRRARWKTK QLEKDYETLK ASYHSLQINY DNLLKEKEKL ENEVVILTDK  180
VLLKEKERQN SESTEPNKPS HLQTQELALN LGSSEEESDV PILGYKQEDL SSVNSVVFDS  240
DSLHCIDGVH SSKLEPADSS HVFEPELSEH SKDDDENLSK NLWPPVCHLP KLEAEVENLS  300
KNILHQVSQL PKLEDIDYEY PSENSCNYGV QTIDQSLWFW SF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	133	141	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	4e-40	HD-ZIP family protein