PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA09100.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

LBD

Protein Properties

Length: 291aa MW: 32716.6 Da PI: 6.6364

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA09100.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	112.9	2.1e-35	10	109	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 aCaaCk++rrkC++dC lapyfp +qpk f+n+h+lFG+sn+lk+++ l++ +r dam+s++y++++r + v+G++ +i++l+ q++q++ el+++++ OVA09100.1 10 ACAACKYQRRKCSNDCLLAPYFPPDQPKVFQNAHRLFGVSNILKIIRPLSPGQRMDAMRSIIYQSNIRDKYRVHGCCYIISQLHLQIHQTNLELDAVNT 108 7*********************************************************************************************99988 PP DUF260 100 e 100 + OVA09100.1 109 Q 109 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MTVKGGTSQA CAACKYQRRK CSNDCLLAPY FPPDQPKVFQ NAHRLFGVSN ILKIIRPLSP 60 GQRMDAMRSI IYQSNIRDKY RVHGCCYIIS QLHLQIHQTN LELDAVNTQL ALCRQQYHNQ 120 LPSPSPQSPS SQLQLGTGGP NNALPLFQHH PYQPFSAMET GNSPANHHSF SNGNNAGYSA 180 MDYIDNKDNM MNPLWVQHPY INNNNNPMAI QSQLMAAQAI PLQQLAEVPQ DYDEMPTFFD 240 TIDDRQSYID SKDHYESSSE SSLKDTKESI EHITENELKN AAACLSLTSV N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	4e-43	LBD family protein