PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA09108.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB_related
Protein Properties Length: 410aa    MW: 45972.2 Da    PI: 5.6269
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA09108.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.56.2e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg WT+eEd +++ +v ++G+g+W++++++ g++R++k+c++rw +yl
       OVA09108.1 14 RGLWTAEEDAKILAYVSRHGTGNWTSVPKKAGLKRCGKSCRLRWTNYL 61
                     788*******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MGRPPCCDKS NVKRGLWTAE EDAKILAYVS RHGTGNWTSV PKKAGLKRCG KSCRLRWTNY  60
LRPDLKHENF TPQEEELIIR LHATIANQLP GRTDNDVKNF WNTKLRKKLF EMGIDPVTHK  120
PFSQILADYG NIGGLPNKTT RFGSLNRDLR NAFMSKSEPI SSVPQDSFSN ITNHSMGINI  180
KTPKMEPIQE IALNNNSWDL LAQLHAIQLV TEASNNNYTN KEIMQPNLNF FHEGSSSSSS  240
ASSSNLINQV TSPPPSILPP QPSVIQSTTP SSPFSWSEFL HEDVFLPSDH QQPQLQQQQN  300
EEFQWLSSST GSLSIQVQAQ NIEIPKMDQF KNYGEEKQSS DGVRDMGNVG NNFDYMGQQQ  360
ATYYPLMSGG EAANAVGSSS SSNNSFIEGI LDQDSEMVMW EFPNLFDDPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28470.14e-69MYB family protein