PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA09171.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

DBB

Protein Properties

Length: 244aa MW: 26944.3 Da PI: 4.5904

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA09171.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.6	2.2e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC++C +e H+ H++ OVA09171.1 4 QCDVCEKAPATVICCADEAALCAKCDVEVHQAnklaskHQR 44 7*****************************76777777775 PP
2	zf-B_box	27.7	5.6e-09	53	94	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + +kC+ +++k + +fC +++ l+C+dC + +H+ H OVA09171.1 53 KLPKCDICQDKTAFIFCVEDRALFCRDCDEPIHSAgslssnH 94 789******************************656666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MKIQCDVCEK APATVICCAD EAALCAKCDV EVHQANKLAS KHQRLLLESL SNKLPKCDIC 60 QDKTAFIFCV EDRALFCRDC DEPIHSAGSL SSNHQRFLAT GIRVALSSNC NKGTEKSCPD 120 PPNNQNLQPF AIKTPAPQPS TYANSPTWAV DDLLQFSDFE SSDKKESIEF GELDWFSDIG 180 LFSNQVPQEA MAAAEVPQLP ISSQPYNNAA TYKSMVKSNY NMPNKKPRIE ISDDEENFTV 240 PDLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	3e-99	DBB family protein