PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA09320.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family LBD
Protein Properties Length: 220aa    MW: 23974.3 Da    PI: 8.4046
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA09320.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601032.6e-322103197
      DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                 +C++C+vlr++C+++C+l+p++     p++q +++ +v+k+FG++ ++++++a+pe++r+++++sl++eA+ r+ +Pv+Gavg+++++++ql+q+++e+
  OVA09320.1   2 SCNGCRVLRKGCSESCILRPCLqwiesPEAQGHATVFVAKFFGRAGLMSFISAVPENQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWQLCQTAVET 100
                 6***********************************************************************************************998 PP

      DUF260  95 all 97 
                 +l+
  OVA09320.1 101 VLR 103
                 876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MSCNGCRVLR KGCSESCILR PCLQWIESPE AQGHATVFVA KFFGRAGLMS FISAVPENQR  60
PALFQSLLFE ACGRTVNPVN GAVGLLWTGN WQLCQTAVET VLRGGTLRPI SDFTNGILMT  120
DQSDGASESQ PICTDMKKMK DPYSRSKASK RKGGFNEVAR FPPTDLDLSL TTSGGGVITN  180
RPEKRRPGTP SMNSEESVTT SFDSGDQMRR GEPKVLDLFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.19e-81LBD family protein