PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA09403.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Trihelix

Protein Properties

Length: 827aa MW: 90006.1 Da PI: 6.4004

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA09403.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	94.8	8.2e-30	123	207	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+ aL+++r+em++++r++ lk+plWe+vs+k++e g+ rs+k+Ckek+en++k+yk++keg+ +r++++s +++f+qlea OVA09403.1 123 RWPRQETIALLKIRSEMDTAFRDATLKGPLWEDVSRKLAELGYIRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKS--YRFFTQLEA 207 8*******************************************************************866665..*****85 PP
2	trihelix	108.2	5.5e-34	552	637	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k evlaLi++r+ +e+r++++ k+plWee+s+ m++ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+ +tcpyf+ql+a OVA09403.1 552 RWPKAEVLALIKLRSGLESRYQEAGPKGPLWEEISAGMQRMGYNRSSKRCKEKWENINKYFKKVKESNKKR-PEDAKTCPYFHQLDA 637 8*******************************************************************8.99999******85 PP

Sequence ? help Back to Top
Protein Sequence Length: 827 aa Download sequence
MQQGGSQYGV SPEMTPFTST TTTTTSTTAT TTRNTHMLGG GVSTSSDHLQ QQLQRQQKSG 60 DAAVPTAEAA SPISSRPPAA VAHTSGSFEE LVGGPGSGGG GYVDEDGLGG EEIERGSTGG 120 GNRWPRQETI ALLKIRSEMD TAFRDATLKG PLWEDVSRKL AELGYIRSAK KCKEKFENVH 180 KYYKRTKEGR AGRQDGKSYR FFTQLEALHT ATTVPSTAVT ITTATAATPT AAAAATTTTN 240 QAVAPVSMGL GMVGSSTSGR IQPTPLPLLD SATPTAAATQ IGVPRSDFQT PPAGISGSTA 300 AAAAAAGISF SSNTSSSSAD SESDDDMEGG GPSSNPVNTR KRKRGGSSSS GSSSRKMMNF 360 FEGLMKQVME KQEAMQQRFL ETIEKREQDR MIREEAWKRQ EMARLTREHE MMAQERAISA 420 SRDAAVIAFL QKITGQTIQL PSPVIIPAAP PPPPPQPPQS IPTPTPPPAP ASAPPQQQQH 480 HQHHHHHHHQ VVQHQQQQQQ QQHHQPSQSR EVIITHHQPS STDHVIVAVP EQQHPPQPEM 540 GSGSGYDSTS SRWPKAEVLA LIKLRSGLES RYQEAGPKGP LWEEISAGMQ RMGYNRSSKR 600 CKEKWENINK YFKKVKESNK KRPEDAKTCP YFHQLDALYR KKLHGGGGGN QTKQEPQLES 660 STSASIDNPN NQKTTTTLQA IMAPPPPPPP PAPSQTTETD TKNNNGGSNN NEGLTDNTSG 720 IVKKPEDIVK ELMEQRHHQQ QQQHQPQSVV MNNYHKLAEE PDSDNLDQDE EEDEENDDEL 780 EDDDEDTEEA EDEDRKMNYK IEFQSRQNTG SSNGGGNPAS TFLAMVQ

Sequence ? help Back to Top

Protein Sequence Length: 827 aa Download sequence

MQQGGSQYGV SPEMTPFTST TTTTTSTTAT TTRNTHMLGG GVSTSSDHLQ QQLQRQQKSG  60
DAAVPTAEAA SPISSRPPAA VAHTSGSFEE LVGGPGSGGG GYVDEDGLGG EEIERGSTGG  120
GNRWPRQETI ALLKIRSEMD TAFRDATLKG PLWEDVSRKL AELGYIRSAK KCKEKFENVH  180
KYYKRTKEGR AGRQDGKSYR FFTQLEALHT ATTVPSTAVT ITTATAATPT AAAAATTTTN  240
QAVAPVSMGL GMVGSSTSGR IQPTPLPLLD SATPTAAATQ IGVPRSDFQT PPAGISGSTA  300
AAAAAAGISF SSNTSSSSAD SESDDDMEGG GPSSNPVNTR KRKRGGSSSS GSSSRKMMNF  360
FEGLMKQVME KQEAMQQRFL ETIEKREQDR MIREEAWKRQ EMARLTREHE MMAQERAISA  420
SRDAAVIAFL QKITGQTIQL PSPVIIPAAP PPPPPQPPQS IPTPTPPPAP ASAPPQQQQH  480
HQHHHHHHHQ VVQHQQQQQQ QQHHQPSQSR EVIITHHQPS STDHVIVAVP EQQHPPQPEM  540
GSGSGYDSTS SRWPKAEVLA LIKLRSGLES RYQEAGPKGP LWEEISAGMQ RMGYNRSSKR  600
CKEKWENINK YFKKVKESNK KRPEDAKTCP YFHQLDALYR KKLHGGGGGN QTKQEPQLES  660
STSASIDNPN NQKTTTTLQA IMAPPPPPPP PAPSQTTETD TKNNNGGSNN NEGLTDNTSG  720
IVKKPEDIVK ELMEQRHHQQ QQQHQPQSVV MNNYHKLAEE PDSDNLDQDE EEDEENDDEL  780
EDDDEDTEEA EDEDRKMNYK IEFQSRQNTG SSNGGGNPAS TFLAMVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-49	Trihelix family protein