PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA09424.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

GRF

Protein Properties

Length: 572aa MW: 62514.4 Da PI: 8.7068

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA09424.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.1	1.8e-24	212	256	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+v++++k+CErHl+rgr+rsrk++e OVA09424.1 212 DPEPGRCRRTDGKKWRCSRDVVADQKYCERHLNRGRHRSRKPVEG 256 79****************************************985 PP
2	QLQ	58.7	1.7e-20	143	179	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +aFT aQ+++L++Q+l+yKy+ +n+P+P++Ll +i+k OVA09424.1 143 GAFTSAQWMELEHQALIYKYITSNMPIPSNLLIPIRK 179 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 572 aa Download sequence
MDFGMVGLDG FVGSESGFTS SMDSEAENRQ KGYGSRVLKQ ARSSGSADDE WRSLKMAKTD 60 DVLASNKMQL QQRTSSLLRS NSLTSDGQQM LSFSSPKSDT PLYSSNTTLP FYHHTLSSYA 120 RNTGLGSGSS NTSMSGVLTG FRGAFTSAQW MELEHQALIY KYITSNMPIP SNLLIPIRKA 180 FERSGYSPFA GSLRPNILGW GSFHMGFSGN TDPEPGRCRR TDGKKWRCSR DVVADQKYCE 240 RHLNRGRHRS RKPVEGQIGR AASGSTTKKV MPMSSSSASV VSRNGASNNL TIRQQQATSL 300 QPGVANISSN YHISRVISNK ENEGGPLQDS QVISMLSPSV NLKPKDNPFE QFSQTKFGCI 360 SSDSVMTTSQ RSSFIDCRNF SSSTDPSDRE SRVQDPLRHF IDDWPKNKHD QTQLSISIPI 420 SSSEFSSSSS SPIHEKDTFS PLRLSREYNP IHMGLGVSNV LDEPTRRQAN WIPISWETSM 480 GGPLGEVLNH TSLTSGDCMN SSSALNLMTE GWDVSPQMDS SPTGVLQKST FGSLSNGSTC 540 SSPRTETNKT QDGASFCDNL LGSPLVNSFP SL

Sequence ? help Back to Top

Protein Sequence Length: 572 aa Download sequence

MDFGMVGLDG FVGSESGFTS SMDSEAENRQ KGYGSRVLKQ ARSSGSADDE WRSLKMAKTD  60
DVLASNKMQL QQRTSSLLRS NSLTSDGQQM LSFSSPKSDT PLYSSNTTLP FYHHTLSSYA  120
RNTGLGSGSS NTSMSGVLTG FRGAFTSAQW MELEHQALIY KYITSNMPIP SNLLIPIRKA  180
FERSGYSPFA GSLRPNILGW GSFHMGFSGN TDPEPGRCRR TDGKKWRCSR DVVADQKYCE  240
RHLNRGRHRS RKPVEGQIGR AASGSTTKKV MPMSSSSASV VSRNGASNNL TIRQQQATSL  300
QPGVANISSN YHISRVISNK ENEGGPLQDS QVISMLSPSV NLKPKDNPFE QFSQTKFGCI  360
SSDSVMTTSQ RSSFIDCRNF SSSTDPSDRE SRVQDPLRHF IDDWPKNKHD QTQLSISIPI  420
SSSEFSSSSS SPIHEKDTFS PLRLSREYNP IHMGLGVSNV LDEPTRRQAN WIPISWETSM  480
GGPLGEVLNH TSLTSGDCMN SSSALNLMTE GWDVSPQMDS SPTGVLQKST FGSLSNGSTC  540
SSPRTETNKT QDGASFCDNL LGSPLVNSFP SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	3e-83	GRF family protein