PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA09548.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 256aa MW: 29152.9 Da PI: 8.7803

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA09548.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.1	6.6e-05	94	116	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ C+++F+++ +L H + H OVA09548.1 94 SCSVCSRVFPTSRLLSIHVSEaH 116 6*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MAMVAERNEL GFPYWNPVRR RFEPDAPFFA SGNLERELLA KQVALDLTED ERYQLQSMED 60 EEERALYCPI VGCGARLNSL EDFEGHYHAR HTASCSVCSR VFPTSRLLSI HVSEAHDSFF 120 QAKVARGYPM YECLVEGCGM KLKSYKSRQQ HLVDKHKFPT SFEFFKKAQP SKKQRQKKPH 180 KQKLADNKAK RENTDTGMDV DETIDGLVSA VSKLSTSDSS PSSVSFGRRR TQVFTFVPRA 240 VVRDRKQNSS VEGSEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14140.1	1e-101	C2H2 family protein