PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA09554.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family NF-YC
Protein Properties Length: 229aa    MW: 25706.8 Da    PI: 4.753
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA09554.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC178.85.1e-56371411102
       NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 
                 ql++fw++q   ie+++dfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdflvdiv
  OVA09554.1  37 QLQMFWTYQrqeIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIV 135
                 89*****998899************************************************************************************** PP

       NF-YC  97 prdelk 102
                 pr+e+k
  OVA09554.1 136 PREEIK 141
                 **9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MENNSNNNNN NNQQQAQPSP FPSQPPFHHL LQQQQQQLQM FWTYQRQEIE QVNDFKNHQL  60
PLARIKKIMK ADEDVRMISA EAPILFAKAC ELFILELTIR SWLHAEENKR RTLQKNDIAA  120
AITRTDIFDF LVDIVPREEI KDETGLGLMG NATASGVPYY YPPVGQTAPG VMIGRPAMPG  180
IDPGMYVHPP SQAWQSVWQS DEGPYGSGAA TGQANLDEQG YAGQQPSDS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1110116RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48590.12e-98NF-YC family protein