PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA09563.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

CAMTA

Protein Properties

Length: 1009aa MW: 112736 Da PI: 6.2879

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA09563.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	180.2	2.4e-56	10	125	2	116
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcy 99 ++e +krwlk+ e++ iL+n+e+h+lt++++++p+sgsl+L+n++++r+frkDG+ w+kkkdg+tv E+he+LKvg+ve+l+cyYah+e+np+fqrr+y OVA09563.1 10 VQEaRKRWLKPAEVLFILQNHENHQLTEAAPQKPPSGSLFLFNKRVLRFFRKDGHDWRKKKDGRTVGEAHERLKVGNVEALNCYYAHGEQNPNFQRRSY 108 66779******************************************************************************************** PP CG-1 100 wlLeeelekivlvhyle 116 w+L++++e+ivlvhy+e OVA09563.1 109 WMLDQAYEHIVLVHYRE 125 *************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1009 aa Download sequence
MSGFNISELV QEARKRWLKP AEVLFILQNH ENHQLTEAAP QKPPSGSLFL FNKRVLRFFR 60 KDGHDWRKKK DGRTVGEAHE RLKVGNVEAL NCYYAHGEQN PNFQRRSYWM LDQAYEHIVL 120 VHYREITEGR YSAGSTSHLS SGSSTLSPDP SLYTSNPGSS SAVTELYEPY RSSFSPGSVE 180 VSSELMVQNN VVDHLGGNDG SGEFSMSNNT EVCQALRRLE EQLSLNDSAT AEISSYYRHN 240 GQSNDLGVLY SETRSNRDNL AASEYGSEFI DDHQYFSEGA GMLDDSESSL ILQHSGDNRE 300 QHHQQFRPEY KIERKDSPFW KEMLELCSGS SLIDRSLNTM DGSEKPLSSE LVKIPAYPAE 360 EPGKWNSQWL DLTGEYSENN SNSFPTSEDN LSMQLSAARQ FLLGSDNPVS PTSVSLLHAV 420 ENSKVSIDSS GLSTHEANPD NYNMWYDQRS QTGILSGAES SLTLTQKQKF NIREISPGWG 480 YAAEDTKVII IGSFLCDPSE SAWNCMFGDI EVPAQIIQQG VLRCQAPPHI SGKVTLCITS 540 GNREPCSEIR EFEYMVRPKS CSHCDLPKRD ATRSTEELLL LVRFAQMLLS DPVDQKADSV 600 ASGNVLKKSN IDEDQWEYMI EALLLGSGTP FSTMDWLLQK LLKDKLQQWL SLKYQEGDTP 660 NCYLSKREQG IIHIVAGLGF EWALNPILHS GISINFRDVN GWTALHWAAR FGREKMVAAL 720 IAAGALAEAV TDPTSQDPAG KTAGSIAAAS GHKGLAGYLS EVALTSHLSS LTIEESEISK 780 VSAAVEAERT IESISSGRLG ATEDQISLKD SLSAVRNAAQ AAARIQSAFR AHSFRRRQQK 840 EAATVSDDEY GFTPGYIHGL SAASKFAFRG RDHKFDKAAL SIQKKYRGWK GRKDFLALRQ 900 KVVRIQAHVR GHQVRKKYKV ILWAVGVLDK VVLRWRRKGT GLRGFKPESE SIDESEDEDI 960 LKVFRKQKVD VAIEEAVSQV MSMVESPEAR QQYRRMLDSY WEAKAMTTS

Sequence ? help Back to Top

Protein Sequence Length: 1009 aa Download sequence

MSGFNISELV QEARKRWLKP AEVLFILQNH ENHQLTEAAP QKPPSGSLFL FNKRVLRFFR  60
KDGHDWRKKK DGRTVGEAHE RLKVGNVEAL NCYYAHGEQN PNFQRRSYWM LDQAYEHIVL  120
VHYREITEGR YSAGSTSHLS SGSSTLSPDP SLYTSNPGSS SAVTELYEPY RSSFSPGSVE  180
VSSELMVQNN VVDHLGGNDG SGEFSMSNNT EVCQALRRLE EQLSLNDSAT AEISSYYRHN  240
GQSNDLGVLY SETRSNRDNL AASEYGSEFI DDHQYFSEGA GMLDDSESSL ILQHSGDNRE  300
QHHQQFRPEY KIERKDSPFW KEMLELCSGS SLIDRSLNTM DGSEKPLSSE LVKIPAYPAE  360
EPGKWNSQWL DLTGEYSENN SNSFPTSEDN LSMQLSAARQ FLLGSDNPVS PTSVSLLHAV  420
ENSKVSIDSS GLSTHEANPD NYNMWYDQRS QTGILSGAES SLTLTQKQKF NIREISPGWG  480
YAAEDTKVII IGSFLCDPSE SAWNCMFGDI EVPAQIIQQG VLRCQAPPHI SGKVTLCITS  540
GNREPCSEIR EFEYMVRPKS CSHCDLPKRD ATRSTEELLL LVRFAQMLLS DPVDQKADSV  600
ASGNVLKKSN IDEDQWEYMI EALLLGSGTP FSTMDWLLQK LLKDKLQQWL SLKYQEGDTP  660
NCYLSKREQG IIHIVAGLGF EWALNPILHS GISINFRDVN GWTALHWAAR FGREKMVAAL  720
IAAGALAEAV TDPTSQDPAG KTAGSIAAAS GHKGLAGYLS EVALTSHLSS LTIEESEISK  780
VSAAVEAERT IESISSGRLG ATEDQISLKD SLSAVRNAAQ AAARIQSAFR AHSFRRRQQK  840
EAATVSDDEY GFTPGYIHGL SAASKFAFRG RDHKFDKAAL SIQKKYRGWK GRKDFLALRQ  900
KVVRIQAHVR GHQVRKKYKV ILWAVGVLDK VVLRWRRKGT GLRGFKPESE SIDESEDEDI  960
LKVFRKQKVD VAIEEAVSQV MSMVESPEAR QQYRRMLDSY WEAKAMTTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-178	CAMTA family protein