PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA09662.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 532aa MW: 58004.7 Da PI: 4.8211

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA09662.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.9	1.4e-11	348	390	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L OVA09662.1 348 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 390 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
MLSRVNGAVW MEEEGEEEDA ISWTRNNVGG GGGGGGGGEN KDDMGSLSTF KSMLEDDWYM 60 NSTENPSHQD FQTIQSHQDI RDITFTSNPI TSENLLLQSV DSSSSCSPSS VFNLDPSQVQ 120 SFLPPKSGLS SLLNVVCNNP FDNGFDLGCE PSFLMGNQTS NLTSFNNLIS SGQMGTPDLS 180 SNSQFPNTRL TPWSDNGGNV GTGFSPIGFG GFENPANSLF LNRSKVLRPL EIFPPVGAQP 240 TLFQKRAALR QNSDSKGGNL GVLSTDNKGK REMEEQQEKW RKNNEEDDMD EASIDGSGLN 300 YDTDEAMENN NKVGESMKNG GNNSNANSTV TGGDQKGKKK GLPAKNLMAE RRRRKKLNDR 360 LYMLRSVVPK ISKMDRASIL GDAIEYLKEL LQRINDLHNE LESTPPGSSL PPTSSFHPLT 420 PTPPTLPCRV KEELCPSSLP SPNSQPARVE VRVREGRAVN IHMFCARRPG LLLSTMRALD 480 GLGIDIQQAV ISCFNGFALD VFRAEQCKEG LDVPPEEIKA VLLNSAGFHG MM

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

MLSRVNGAVW MEEEGEEEDA ISWTRNNVGG GGGGGGGGEN KDDMGSLSTF KSMLEDDWYM  60
NSTENPSHQD FQTIQSHQDI RDITFTSNPI TSENLLLQSV DSSSSCSPSS VFNLDPSQVQ  120
SFLPPKSGLS SLLNVVCNNP FDNGFDLGCE PSFLMGNQTS NLTSFNNLIS SGQMGTPDLS  180
SNSQFPNTRL TPWSDNGGNV GTGFSPIGFG GFENPANSLF LNRSKVLRPL EIFPPVGAQP  240
TLFQKRAALR QNSDSKGGNL GVLSTDNKGK REMEEQQEKW RKNNEEDDMD EASIDGSGLN  300
YDTDEAMENN NKVGESMKNG GNNSNANSTV TGGDQKGKKK GLPAKNLMAE RRRRKKLNDR  360
LYMLRSVVPK ISKMDRASIL GDAIEYLKEL LQRINDLHNE LESTPPGSSL PPTSSFHPLT  420
PTPPTLPCRV KEELCPSSLP SPNSQPARVE VRVREGRAVN IHMFCARRPG LLLSTMRALD  480
GLGIDIQQAV ISCFNGFALD VFRAEQCKEG LDVPPEEIKA VLLNSAGFHG MM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	338	356	KKKGLPAKNLMAERRRRKK
2	350	357	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-131	bHLH family protein