PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA09913.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

LBD

Protein Properties

Length: 204aa MW: 22477.7 Da PI: 5.1705

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA09913.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	134	5.7e-42	32	131	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C ++Cvlapyfp ++p kf +h++FGasn++k+l++lpe++r da+ss+vyeA+ r+rdPvyG++g+i +l++q+++l+a+la++++ OVA09913.1 32 PCAACKILRRRCIEKCVLAPYFPPNEPLKFTTAHRVFGASNIIKMLQELPESQRADAVSSMVYEANSRIRDPVYGCAGTICQLHKQVSELQAQLAKAQA 130 7***********************************************************************************************998 PP DUF260 100 e 100 e OVA09913.1 131 E 131 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MVSSDTTTTT STTTITTSST LSPPPPPVVV SPCAACKILR RRCIEKCVLA PYFPPNEPLK 60 FTTAHRVFGA SNIIKMLQEL PESQRADAVS SMVYEANSRI RDPVYGCAGT ICQLHKQVSE 120 LQAQLAKAQA EILNMQCQQS NLVALICMEM THSQQPISPL STTTSQQVLV DDYFMNNNTP 180 SFQTNDVFFD DANIGSVVWE PLWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	1e-60	LBD family protein