PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA10032.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 252aa MW: 28460.8 Da PI: 8.3384

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA10032.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.1	2.3e-09	20	65	1	44
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 r +W+ d+l+ +a++ ++ g +W++Ia +++ g+t+ ++++++ OVA10032.1 20 RSPWSRSQDKLFEQAIAIFPDGtpdRWRKIACHVP-GKTPWEIREHY 65 789***************99*********.********9 PP
2	Myb_DNA-binding	43.7	6.3e-14	124	168	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + +++G+g+W++I+r Rt+ q+ s+ qky OVA10032.1 124 PWTEEEHKLFLIGLQRYGKGDWRSISRNAVVSRTPTQVASHAQKY 168 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MFPDDFLMIS SHFPSSSSSR SPWSRSQDKL FEQAIAIFPD GTPDRWRKIA CHVPGKTPWE 60 IREHYEALVH DVLEIDSGRV ELPRYEDDDS FSPSWASECG SRTNQIEFGS KSKHTEMERK 120 KGVPWTEEEH KLFLIGLQRY GKGDWRSISR NAVVSRTPTQ VASHAQKYYL RLNSMKKEKT 180 KRSSIHDITT VDTCSVSPPP PNDQTRVGVG PSSNGSNSIQ HETGTKMGPP KSRSFLDQGC 240 SSSGYQHLGF PM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	3e-70	MYB family protein