PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA10047.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MIKC_MADS

Protein Properties

Length: 253aa MW: 29069.8 Da PI: 9.2639

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA10047.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	84	8.8e-27	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+EL +LCdaev ++ifsstgkly+++s OVA10047.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGLMIFSSTGKLYDFAS 59 8***********************************************86 PP
2	K-box	89.8	5.1e-30	87	176	9	98
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + +++ + +q+e+a L+++++nLq+++R+l+Ge+L+ Ls+k+Lq+Le+qLe sl+ +R kK+++l+++ieel +k + +++en++L kk+ OVA10047.1 87 NPTSEVKFWQREAASLRQQLQNLQENHRQLMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILTDKIEELNRKGNLIHQENMELYKKV 176 567889*********************************************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGLMIFSS TGKLYDFAST 60 RSDDGTSMKS VIERYNKSKE EHHQLLNPTS EVKFWQREAA SLRQQLQNLQ ENHRQLMGEE 120 LSGLSVKDLQ NLENQLEMSL RGVRMKKDQI LTDKIEELNR KGNLIHQENM ELYKKVNLIH 180 QENMELHEKV YGSSRDVSGA NRNSLLPNDF SIGDDSHVPV HLQLSQPQQE NYDTPARATK 240 LGESTFYVKV TQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57230.1	1e-113	MIKC_MADS family protein