PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA10080.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 233aa    MW: 26362.1 Da    PI: 10.1559
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA10080.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF71.95.4e-231764148
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
                krie +  rqvtfskRr+g++KKA+EL++LC+ae a+i+fs+ gk + 
  OVA10080.1 17 KRIEKEDARQVTFSKRRAGLFKKASELCILCGAETAIIVFSPAGKSFS 64
                79******************************************9665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MVTKRKPSMG RQKIEIKRIE KEDARQVTFS KRRAGLFKKA SELCILCGAE TAIIVFSPAG  60
KSFSFGHPSV ETVVDRFLSG SPQNHVRTPT PLIDSHRGAS VRDLNKQYTE VLNQLEAEKK  120
RGVELEKMRK ASRNQFWWES PIDELGLREL EQLRASMEEL KKNVAVRTDE LLINASFSTS  180
FLPAAANSSI GMTHEYLFET KPYPFETKPN PNHLQTSVSS HGYGFGFGRR GPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.17e-54M-type_MADS family protein