PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA10222.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 415aa MW: 47336.7 Da PI: 6.9568

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA10222.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.4	3e-17	69	116	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++q+G+g+W++++ g+ R+ k+c++rw +yl OVA10222.1 69 KGPWTPEEDIILVSYIQQHGPGNWRSVPPNTGLLRCSKSCRLRWTNYL 116 79****************************99**********97 PP
2	Myb_DNA-binding	44.6	3.4e-14	122	167	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E+ ++++ +lG++ W++Ia++++ Rt++++k++w+++l OVA10222.1 122 RGNFTPHEEGMIIHLQSLLGNK-WAAIASYLP-QRTDNDIKNYWNTHL 167 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MAIPETNPPG DAGAKPEDDE NNISSGSTTF DWGRGIPLRL GKREETLARL HLEFDEGRPP 60 CCDKVGIKKG PWTPEEDIIL VSYIQQHGPG NWRSVPPNTG LLRCSKSCRL RWTNYLRPGI 120 KRGNFTPHEE GMIIHLQSLL GNKWAAIASY LPQRTDNDIK NYWNTHLKKK IKKFQSALES 180 HRHMASNSTT TTSYDDNHHH QLINKSYSSS STTDQKRILI NLTDQSTLVN VSNKFNQQLQ 240 STTSTSTYAS STENISRLLE GWMRTSPKTT TILNKSQQKE KLKNQNTNHF IPTTTSTHPI 300 ECKDQPNKFE QQESCDLISH EDFEYSLLSF ENMSNIAWHK SSTSDSDLHG LTQITNNTDE 360 KLRLLSDASM QRLIENQQQP FSLFEKWLLD EATDQQVQDL IDLSSINDHR FPANL

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MAIPETNPPG DAGAKPEDDE NNISSGSTTF DWGRGIPLRL GKREETLARL HLEFDEGRPP  60
CCDKVGIKKG PWTPEEDIIL VSYIQQHGPG NWRSVPPNTG LLRCSKSCRL RWTNYLRPGI  120
KRGNFTPHEE GMIIHLQSLL GNKWAAIASY LPQRTDNDIK NYWNTHLKKK IKKFQSALES  180
HRHMASNSTT TTSYDDNHHH QLINKSYSSS STTDQKRILI NLTDQSTLVN VSNKFNQQLQ  240
STTSTSTYAS STENISRLLE GWMRTSPKTT TILNKSQQKE KLKNQNTNHF IPTTTSTHPI  300
ECKDQPNKFE QQESCDLISH EDFEYSLLSF ENMSNIAWHK SSTSDSDLHG LTQITNNTDE  360
KLRLLSDASM QRLIENQQQP FSLFEKWLLD EATDQQVQDL IDLSSINDHR FPANL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08810.1	2e-90	MYB family protein