PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA10232.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 174aa MW: 19573.5 Da PI: 7.8313

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA10232.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	49	71	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H OVA10232.1 49 FSCNYCQRKFYSSQALGGHQNAH 71 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
MEFQPNTSLA LTTSNNNQDL NLELLLEPRP SSSSASSSIS HTGDQPRIFS CNYCQRKFYS 60 SQALGGHQNA HKLERSLAKK SRQLSSVVRP HGGSNSSTHG VQVHHHQSSS MVGFEYQHVG 120 RFGDDHEMVG YGRRDQMMGY GLNEGEGSWP KSYRSRENVH HQEEFNQLDL SLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57520.1	5e-22	C2H2 family protein