PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA10252.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

FAR1

Protein Properties

Length: 175aa MW: 19973.5 Da PI: 8.7901

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA10252.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52	2.3e-16	78	174	2	85
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 +YneYA++vGFs+r++k+++s+ +g ++f+Cskeg+r+ ++++ + +rr+ ++ r+gC ak k e +++ +++ + eH OVA10252.1 78 YYNEYARTVGFSIRRAKNRRSNIDGALLFQRFCCSKEGHRRARRDNdgeepkrmkdgvlVKVRRRNVKSIRVGCSAKGKAYAEVSKTHSINSRRYEH 174 8**************************************999999*******989999999********99999999999998888888 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MDMCFMCRFK ELAVMENTGQ YDSLGANDVT FGDLPECGDS HAVEGLPSST ELNAPNEVTF 60 SKPFVGMEFD SLDKAYFYYN EYARTVGFSI RRAKNRRSNI DGALLFQRFC CSKEGHRRAR 120 RDNDGEEPKR MKDGVLVKVR RRNVKSIRVG CSAKGKAYAE VSKTHSINSR RYEHE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18960.1	1e-12	FAR1 family protein