PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA10530.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Protein Properties

Length: 342aa MW: 39038 Da PI: 9.5008

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA10530.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.7	9.6e-23	19	110	1	100
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ffkv l+++rl++p +f++++++ ees +l+ +sg +W vkl +k+ ++++l++GW++Fv+++ L+ +f+vF++dg+++f +v++f+k OVA10530.1 19 FFKVV--LPDLTTHRLRIPPEFMKHISE--EESDRAILKGPSGSQWHVKL--CKTEDGTYLQDGWQDFVRDHSLCYYEFLVFRYDGNMCF--NVQIFDK 109 77877..77889999******77764..46679***********..**********************************..***98 PP S CS B3 100 s 100 s OVA10530.1 110 S 110 5 PP
2	B3	63.5	3.2e-20	255	337	9	97
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 +v ++ l +pk f+++h ++ s++++l++++g+ W v+l + ++g+y + +GW Fv+ n+L+egD+++F+l+g+ ef +v++f OVA10530.1 255 NVRTRFVLNIPKGFCTAHL--PRFSTKIILRNPRGKDWFVNL--KYTGGKYSFVGGWTAFVRGNKLEEGDICIFELVGKCEF--CVHIF 337 566778899******96..56899************..77778899***********************98888..99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MVKNTGEKIC PPVSRTPHFF KVVLPDLTTH RLRIPPEFMK HISEEESDRA ILKGPSGSQW 60 HVKLCKTEDG TYLQDGWQDF VRDHSLCYYE FLVFRYDGNM CFNVQIFDKS GCEREDACSS 120 KTQGLIFPIE KKFVSYAGKK RGKPPKRCAG SADLFPSRDC YTGKKRGRQP KKFAGSADLF 180 PFRACQRDSG IEAVAEKRIK TEDVSMPTSE RDSQARGCLS RRKLKTEEEK AKVWKATESF 240 SSSCPYFAKC LNCYNVRTRF VLNIPKGFCT AHLPRFSTKI ILRNPRGKDW FVNLKYTGGK 300 YSFVGGWTAF VRGNKLEEGD ICIFELVGKC EFCVHIFPVG PL

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MVKNTGEKIC PPVSRTPHFF KVVLPDLTTH RLRIPPEFMK HISEEESDRA ILKGPSGSQW  60
HVKLCKTEDG TYLQDGWQDF VRDHSLCYYE FLVFRYDGNM CFNVQIFDKS GCEREDACSS  120
KTQGLIFPIE KKFVSYAGKK RGKPPKRCAG SADLFPSRDC YTGKKRGRQP KKFAGSADLF  180
PFRACQRDSG IEAVAEKRIK TEDVSMPTSE RDSQARGCLS RRKLKTEEEK AKVWKATESF  240
SSSCPYFAKC LNCYNVRTRF VLNIPKGFCT AHLPRFSTKI ILRNPRGKDW FVNLKYTGGK  300
YSFVGGWTAF VRGNKLEEGD ICIFELVGKC EFCVHIFPVG PL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	6e-29	B3 family protein