PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA10707.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

TCP

Protein Properties

Length: 269aa MW: 28200.6 Da PI: 10.1978

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA10707.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124	1.6e-38	41	137	2	104
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaakskks 100 ++kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++a+++ ++s s+ +s ss++a+ + + + OVA10707.1 41 TVKKPPAKDRHSKVDGRGRRIRMPIVCAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFS-TVSVSVRGS--SSSSASV---SASLD 133 689******************************************************************888.333333333..2222222...22333 PP TCP 101 qksa 104 qk++ OVA10707.1 134 QKPT 137 3333 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MSTTDGATNG ALMDPQRQQP QTNGALTDSQ RQQSQTNGAL TVKKPPAKDR HSKVDGRGRR 60 IRMPIVCAAR VFQLTRELGH KSDGQTIEWL LRQAEPSIIA ATGTGTTPAN FSTVSVSVRG 120 SSSSSASVSA SLDQKPTAQM MGPTPFLLGK RLRTDGGDDV SSNDDSSVGP TAAAAAAGGF 180 WALPARPDFG QVWSFSAAPE MVVPMAMPMP LAMSSSQPLI SGRFVQQSVG EASAARVGNY 240 LPISQGHLNL LASLSGNPAN SVRREDEPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	1e-69	TCP family protein