PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA10997.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

YABBY

Protein Properties

Length: 190aa MW: 20884.4 Da PI: 9.5079

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA10997.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	138.2	9.4e-43	3	149	3	163
YABBY 3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekl 101 s se++Cyv+CnfC+t+lav vP ++++vtv+CG+C l ++ + +q+++++ + ++ ++ + + k ++s+s s OVA10997.1 3 YLSHSEHLCYVRCNFCSTVLAVGVPCRRSVETVTVKCGYCNCLSFLSTRPLVQAQSSSLD--L--------QMSAFQQGFGIDYRKGGQSSASP-S--- 87 6789**********************************88766555555555555443..2........33444556666555555544444.4... PP YABBY 102 senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 s++++ ++p++p v++PPe++ r Psaynrf+keeiqrika+nPdi hr afs aaknWa + OVA10997.1 88 STSSQPKSPNAPYVVKPPERKHRLPSAYNRFMKEEIQRIKAANPDIPHRVAFSSAAKNWARY 149 5678889999999*********************************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MEYLSHSEHL CYVRCNFCST VLAVGVPCRR SVETVTVKCG YCNCLSFLST RPLVQAQSSS 60 LDLQMSAFQQ GFGIDYRKGG QSSASPSSTS SQPKSPNAPY VVKPPERKHR LPSAYNRFMK 120 EEIQRIKAAN PDIPHRVAFS SAAKNWARYI PHPSTGSTTG STTGSTTDQS SNNERRNVCG 180 IENVADATRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	4e-56	YABBY family protein