PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA10998.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 228aa MW: 26276.1 Da PI: 5.1623

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA10998.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.3	8.2e-19	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed+ll d+v ++G g+W+++ar g++R +k+c++rw +yl OVA10998.1 16 KGPWTADEDQLLTDYVSLHGEGRWSSVARSSGLNRNGKSCRLRWVNYL 63 79********************************************97 PP
2	Myb_DNA-binding	48.1	2.7e-15	73	114	5	48
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 T++E+ l++++ +++G++ W+ Iar+++ gRt++++k++w+++l OVA10998.1 73 TPQEESLIIELQALWGNK-WSMIARCLP-GRTDNEIKNYWRTHL 114 9***************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MVGCGGWEVP EQGWRKGPWT ADEDQLLTDY VSLHGEGRWS SVARSSGLNR NGKSCRLRWV 60 NYLRPGLKKS HLTPQEESLI IELQALWGNK WSMIARCLPG RTDNEIKNYW RTHLKSKEKS 120 SSYERKSRIQ TLKQQLKDQQ QQDQQQQEQQ QQDGLEETVF MYPTSSGDQC HEPLVFDRQD 180 GTSSSLLGEE EEENLWGGLW NLNDIHLNFD HTCGMQNQTA SCGDDPCM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	6e-57	MYB family protein