PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA11088.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family B3
Protein Properties Length: 178aa    MW: 20542.5 Da    PI: 6.7786
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA11088.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.63.4e-1171170293
                 EEE-..-HHHHT.T-EE--HHH.HTT..........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS
          B3   2 fkvltpsdvlks.grlvlpkkfaeeh..........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88 
                  k+lt+sd  +s grl+++ +fa++           ++  + ++ +t++ ++ +++++ ++ ++++ ++vlt+GW+eF k+ +Lk+ D++ + + ++ s
  OVA11088.1  71 TKKLTKSDIDESqGRLIISIDFAKAQilpllkegveDS--HAGIPVTIY-TRLNEFKMIYKCWNNK-THVLTSGWNEFWKECQLKVDDTIYLWVFRHvS 165
                 58999999888779*********999999888543221..223333333.3446677777669987.789*******************9766554445 PP

                 EE..E CS
          B3  89 efelv 93 
                 +++l+
  OVA11088.1 166 TKKLC 170
                 55555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MEDEDVHNVA VVQATQNRDT VSREAASTLI HCQRSELDSE TSNRLKMLKR IIHDNPMMGL  60
FDKNSYSSCL TKKLTKSDID ESQGRLIISI DFAKAQILPL LKEGVEDSHA GIPVTIYTRL  120
NEFKMIYKCW NNKTHVLTSG WNEFWKECQL KVDDTIYLWV FRHVSTKKLC FAITADQD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03170.12e-20B3 family protein