PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA11457.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

ARF

Protein Properties

Length: 1145aa MW: 128851 Da PI: 6.6955

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA11457.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	69.5	4.4e-22	126	227	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+lt sd++++g +++p++ ae++ +++++ ++l+ +d++ W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F ++++ +l+ OVA11457.1 126 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfSMQPPA-QELVARDLHDVAWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFI--RDEKSQLL 221 99***************************9445444.38**********************************************..45677789 PP EEEE-S CS B3 94 vkvfrk 99 ++++r+ OVA11457.1 222 LGIRRA 227 999997 PP
2	Auxin_resp	123.5	1.5e-40	252	334	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras+seFvv+++k++ka++++vs+GmRf+m+fete+s rr++Gt++g+sdldpvrW+ S+Wr+L+ OVA11457.1 252 AAHAAASNSPFTIFYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDLDPVRWKSSQWRNLQ 334 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1145 aa Download sequence
MKVHSNGISA NSGEGERKSI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKD 60 TDSIPSYPSL PSKLICVLHN VTLHADAETD EVYAQMTLQP VNKYDKEALL ASDMGLKQSK 120 QPSEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQELVARD LHDVAWTFRH 180 IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKSQL LLGIRRANRQ QPALSSSVIS 240 SDSMHIGILA AAAHAAASNS PFTIFYNPRA SPSEFVVPLA KYNKAMYTQV SLGMRFRMMF 300 ETEESGVRRY MGTITGISDL DPVRWKSSQW RNLQVGWDES AAGERPSRVS IWEIEPVATP 360 FYICPPPFFR PKFPNQPGMP DDESDVENAF KRAMPWLGDD LGIKDAQNPM FPGLSLVQWM 420 SMQQNPQLSA AQSAFFPSMV SSGSLHNNLT TDDPSKILNF QSHASGGPNV HFNIPKTNQQ 480 TELFQQSNLM WSQQQQRQHQ QLQTLGINPQ PQQQQLQPQQ HQQQQHKQLH QQQQQPQQQQ 540 QQQQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ QQLQHQQQLQ QQQQHQQQHQ QQPQIQQKPQ 600 QQQQQQQQQQ QHEHQQQQLL RSSGISNGVV APTHIPDQNL QKPVIHSQLQ QQLPTSNTQS 660 QQNFHSPNQN PLLLSSLPQD LQFQRQLEQQ QNLLQRQQQQ NAQLQQLPMP QHELQLQLLQ 720 KLQQQQQLLS QVSPRLQPQL PQQQQVHQQN QQFQQQQPSQ PLQQQQQLGS LTNCSPSLLN 780 QPQNFPSNHL QGQQKPPALI RAHSGLTDGD APSCSTSPST NNCQVSGSSF LNRTHQSPAI 840 LLEDMVVPPA NNLVQELQSK SEVRIKHELP NPKEPEQLAY RGATNDPLEA SSSATSYCLD 900 GSSLQHNFSL PNFCLDGDVQ GDAPNNLLFG VNIDGLTPDA LLSRRFGSGK DLQNLISSYG 960 GTQRDIETEI STAAISSQSF GVPDMSFKPG CSGDAPINDN GVLNRGLWAN QTPQRMRTFT 1020 KVQKRGSVGR SIDITRYKAY DELRYDLARM FGIEGQLEDS HRTEWKLVYV DHENDILLVG 1080 DDPWEEFVSC VQSIKILSSA EVQQLSLDGD LGNVQVNNQA CSGSGSGNAW RGQYDDHSAA 1140 ASFDR

Sequence ? help Back to Top

Protein Sequence Length: 1145 aa Download sequence

MKVHSNGISA NSGEGERKSI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKD  60
TDSIPSYPSL PSKLICVLHN VTLHADAETD EVYAQMTLQP VNKYDKEALL ASDMGLKQSK  120
QPSEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQELVARD LHDVAWTFRH  180
IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKSQL LLGIRRANRQ QPALSSSVIS  240
SDSMHIGILA AAAHAAASNS PFTIFYNPRA SPSEFVVPLA KYNKAMYTQV SLGMRFRMMF  300
ETEESGVRRY MGTITGISDL DPVRWKSSQW RNLQVGWDES AAGERPSRVS IWEIEPVATP  360
FYICPPPFFR PKFPNQPGMP DDESDVENAF KRAMPWLGDD LGIKDAQNPM FPGLSLVQWM  420
SMQQNPQLSA AQSAFFPSMV SSGSLHNNLT TDDPSKILNF QSHASGGPNV HFNIPKTNQQ  480
TELFQQSNLM WSQQQQRQHQ QLQTLGINPQ PQQQQLQPQQ HQQQQHKQLH QQQQQPQQQQ  540
QQQQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ QQLQHQQQLQ QQQQHQQQHQ QQPQIQQKPQ  600
QQQQQQQQQQ QHEHQQQQLL RSSGISNGVV APTHIPDQNL QKPVIHSQLQ QQLPTSNTQS  660
QQNFHSPNQN PLLLSSLPQD LQFQRQLEQQ QNLLQRQQQQ NAQLQQLPMP QHELQLQLLQ  720
KLQQQQQLLS QVSPRLQPQL PQQQQVHQQN QQFQQQQPSQ PLQQQQQLGS LTNCSPSLLN  780
QPQNFPSNHL QGQQKPPALI RAHSGLTDGD APSCSTSPST NNCQVSGSSF LNRTHQSPAI  840
LLEDMVVPPA NNLVQELQSK SEVRIKHELP NPKEPEQLAY RGATNDPLEA SSSATSYCLD  900
GSSLQHNFSL PNFCLDGDVQ GDAPNNLLFG VNIDGLTPDA LLSRRFGSGK DLQNLISSYG  960
GTQRDIETEI STAAISSQSF GVPDMSFKPG CSGDAPINDN GVLNRGLWAN QTPQRMRTFT  1020
KVQKRGSVGR SIDITRYKAY DELRYDLARM FGIEGQLEDS HRTEWKLVYV DHENDILLVG  1080
DDPWEEFVSC VQSIKILSSA EVQQLSLDGD LGNVQVNNQA CSGSGSGNAW RGQYDDHSAA  1140
ASFDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein