PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA11569.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

ARF

Protein Properties

Length: 1008aa MW: 110372 Da PI: 6.6127

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA11569.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75.2	7.3e-24	127	228	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+lt sd++++g +++p++ ae+ +++++++ +l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F ++++ +l+ OVA11569.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfSQQPPCQ-ELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEKNQLF 222 99***************************86666675.9*********************************************..8889999 PP EEEE-S CS B3 94 vkvfrk 99 ++++r+ OVA11569.1 223 LGIRRA 228 ***997 PP
2	Auxin_resp	118.2	6.7e-39	253	336	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+t+s F+++YnPras+seFv++++++ ka++ ++vsvGmRf+m fete+ss rr++Gt++gvsdldpvrW+nS+Wrs+k OVA11569.1 253 AAHAAATNSRFTIFYNPRASPSEFVIPLARFAKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGVSDLDPVRWRNSHWRSVK 336 79*******************************9789****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1008 aa Download sequence
MRLSSSGLSH QTQEGEKRCL NSELWHACAG PLVSLPAVGS RVVYFPQGHS EQVAASTNKE 60 VDAHIPNYPS LSPQLICLLH NVTMHADVET DEVYAQMTLQ PLSPQEQKDA YLPAEMGSAN 120 KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPCQELIAR DLHDNEWKFR 180 HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LFLGIRRAQR PQTVMPSSVL 240 SSDSMHIGLL AAAAHAAATN SRFTIFYNPR ASPSEFVIPL ARFAKAVYHT RVSVGMRFRM 300 LFETEESSVR RYMGTITGVS DLDPVRWRNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT 360 TFPMYPSPFP LRLKRPWPSG IPSLHGRDDD LGINSPLMWL HGDGSDRGIQ SLNFQGIGVT 420 PWMQPRLDAS LLGMQPDMYQ AMAAAALQEM RAVDPCKQGP ASLLQFHQPQ NVPSISDLMQ 480 TQRLPQSQSQ HAFLQSIHGS QTQAQAQAQA HAQAQSQAQS QAQAQAQTQA LAQAQAQAQG 540 QGQGQGQAQA QAQAQAQAQA HAQAQAQAQA QAQAQAQAQA QAQAQAQAQA QAQAQAQAQA 600 QAQAQAQAQA QALAQAQARA QAQVHVQAQL LQQQLKHHHS FNDQQFHQLQ KQQQQIPNVA 660 SALSQLSSAS QSPTASLQTI SSLRQQQNFP DANGNSLSTS SVSPLHSLLG SFSREEASHL 720 LNLPRTNPLI SSSAWVSKRA AVESLLPSAA AQSVIPHVEQ LGPPQSNDSQ NSISLLPFPG 780 RECSVDQEGS TDPQSHLLFG VNIDSASLLM QNEMPNLRVV SSETDSTTSP FAASNFLSST 840 GSDFPINPTM TNSSCLDESG FLQSPDNVGQ VNPPTRTFVK VHKSGSFGRS LDITRFSSYH 900 ELRGELARMF GLEGQLEDPL RSGWQLVFVD RENDVLLLGD DPWQEFVNNV WCIKILSPQE 960 VQEMGNQDLE LLDSVQRLSG GSSCDEYVSR QDSRNLSTGI TSVGSLDY

Sequence ? help Back to Top

Protein Sequence Length: 1008 aa Download sequence

MRLSSSGLSH QTQEGEKRCL NSELWHACAG PLVSLPAVGS RVVYFPQGHS EQVAASTNKE  60
VDAHIPNYPS LSPQLICLLH NVTMHADVET DEVYAQMTLQ PLSPQEQKDA YLPAEMGSAN  120
KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPCQELIAR DLHDNEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LFLGIRRAQR PQTVMPSSVL  240
SSDSMHIGLL AAAAHAAATN SRFTIFYNPR ASPSEFVIPL ARFAKAVYHT RVSVGMRFRM  300
LFETEESSVR RYMGTITGVS DLDPVRWRNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT  360
TFPMYPSPFP LRLKRPWPSG IPSLHGRDDD LGINSPLMWL HGDGSDRGIQ SLNFQGIGVT  420
PWMQPRLDAS LLGMQPDMYQ AMAAAALQEM RAVDPCKQGP ASLLQFHQPQ NVPSISDLMQ  480
TQRLPQSQSQ HAFLQSIHGS QTQAQAQAQA HAQAQSQAQS QAQAQAQTQA LAQAQAQAQG  540
QGQGQGQAQA QAQAQAQAQA HAQAQAQAQA QAQAQAQAQA QAQAQAQAQA QAQAQAQAQA  600
QAQAQAQAQA QALAQAQARA QAQVHVQAQL LQQQLKHHHS FNDQQFHQLQ KQQQQIPNVA  660
SALSQLSSAS QSPTASLQTI SSLRQQQNFP DANGNSLSTS SVSPLHSLLG SFSREEASHL  720
LNLPRTNPLI SSSAWVSKRA AVESLLPSAA AQSVIPHVEQ LGPPQSNDSQ NSISLLPFPG  780
RECSVDQEGS TDPQSHLLFG VNIDSASLLM QNEMPNLRVV SSETDSTTSP FAASNFLSST  840
GSDFPINPTM TNSSCLDESG FLQSPDNVGQ VNPPTRTFVK VHKSGSFGRS LDITRFSSYH  900
ELRGELARMF GLEGQLEDPL RSGWQLVFVD RENDVLLLGD DPWQEFVNNV WCIKILSPQE  960
VQEMGNQDLE LLDSVQRLSG GSSCDEYVSR QDSRNLSTGI TSVGSLDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30330.1	0.0	ARF family protein