PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA11639.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family bHLH
Protein Properties Length: 197aa    MW: 22876.5 Da    PI: 7.7939
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA11639.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.32.7e-133479555
                HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                + e ErrRRd+iN+++  Lr l+P       + + Ka+i + A+eYIk+Lq
  OVA11639.1 34 NLETERRRRDKINDRLMALRALVPII-----TNMKKATIMTDAIEYIKELQ 79
                5689*********************6.....5799***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MEDLYFMENE TCSQGSSSRR RQNINKTTQF KSKNLETERR RRDKINDRLM ALRALVPIIT  60
NMKKATIMTD AIEYIKELQK EVKGLTDSLR EMEAEFAVEE EKLGMSQADT KKCRIEAEVK  120
VIQADENKLW IRVLCEKNRG GFTKLIEALN YLGFQVIDTN FICSKGVTSI MFYVKVIGVE  180
DLNIYLCKME FVLGYPD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13843ERRRRD
23944RRRRDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.11e-32bHLH family protein