PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA11660.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 97aa    MW: 10826.6 Da    PI: 9.5635
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA11660.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF671.9e-211562249
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                +i+ k   qvtfskRrng++KKA+EL++LC+ae a++++s+ gk + +
  OVA11660.1 15 KIKRKDYLQVTFSKRRNGLFKKASELCTLCGAETAILVYSPAGKAFSF 62
                57777778***********************************98766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    
MEKKTQGRKK IDMEKIKRKD YLQVTFSKRR NGLFKKASEL CTLCGAETAI LVYSPAGKAF  60
SFGHPCVEST MDKFLATASL IEIGESSMGV PSFPDYH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.13e-33M-type_MADS family protein