PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA11798.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 186aa    MW: 21484.9 Da    PI: 10.1064
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA11798.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF61.11.3e-192162849
                HHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  8 nrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                  qvtfskRrng++KKA+EL+++C+a+ a++++s+ gk + +
  OVA11798.1 21 YLQVTFSKRRNGLFKKASELCTMCGAKTAIVVYSPAGKAFSF 62
                569**********************************97766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MEKKTQGRKK IDMEKIKRRD YLQVTFSKRR NGLFKKASEL CTMCGAKTAI VVYSPAGKAF  60
SFGHPCVEST LDKFLATASL IEIGESSLGV PSFPDYHWNI GINKLNRHIN ELVNQLEAEK  120
KYREGQFLWN KPIENLKFHE LEQLRVSMEE LKIKMVNRTE GLKRASMLSS YIDINQVRRT  180
EDKGVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.13e-38M-type_MADS family protein