PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA11856.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family GRAS
Protein Properties Length: 499aa    MW: 56227.8 Da    PI: 5.6402
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA11856.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS359.35.7e-1101244983374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 +lLle A+a+++++ +++q+l++ l+el+sp+gd+ q+la+yf++AL  r+++s++++y++l++ ++++ + +++ +++  f+evsP+ +f+h++ N a
  OVA11856.1 124 NLLLETARAIADKNSARVQQLMWMLNELSSPYGDTDQKLASYFLQALFCRMTDSGERCYRTLRSASEKTCSFESTRKMVLKFQEVSPWTTFGHVASNGA 222
                 79************************************************************8888876665555555556****************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvlvak.rledleleeLrv 196
                 I+ea+ege+++HiiD++ ++++QWp+Ll+aLa+R++++p+lR+T+v++ ++g    ++ ++e+g r++kfA+ +gvpf+fnv+++  +l++l+++eL++
  OVA11856.1 223 IMEAFEGESKLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVATAAGtaaVQKVMKEIGTRMEKFARLMGVPFKFNVIHHVgDLSELNFNELDI 321
                 ************************************************8888999999************************96666************ PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsleaklpreseerikvErellg 291
                 k +EalaVn+v  lh++     +++++rd v++++++l+Pk+v+vve+ead++ +    +F+++f e+l+++ + f++l++++ r+s+er ++Er+  g
  OVA11856.1 322 KDDEALAVNCVGTLHSVG----DISNRRDIVVSAFRRLNPKIVTVVEEEADLDIGvdgvDFVKGFQESLRWFRVYFEALDESFTRTSNERLMLERA-AG 415
                 *****************7....88899999*******************9875444455*************************************.** PP

        GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve.eesgslvlgWkdrpLvsvSaWr 374
                 r++v+++ac   e++er+e++++W++rl++aGF++v++s+++ +++++llr++k +g+++  ++++ ++l Wkd+p+v+++aWr
  OVA11856.1 416 RALVDLLACPSGESIERRESAARWSHRLRAAGFSSVAYSDDVSDDVRALLRRYK-EGWSMTqSSDAGIFLAWKDQPVVWACAWR 498
                 ******************************************************.77666615567777**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    
MDTLFRLVSL QSSDQSINNP NISTSRTTTT SSTSRSSSRV NNNHHYYQEE ECSNNNFFMD  60
EDNFSSSSSK HFFPYYPSTT TNTTTTTNTP TPTSTTSTHD QFTYTHQPQP DLGLELSGNK  120
WSSNLLLETA RAIADKNSAR VQQLMWMLNE LSSPYGDTDQ KLASYFLQAL FCRMTDSGER  180
CYRTLRSASE KTCSFESTRK MVLKFQEVSP WTTFGHVASN GAIMEAFEGE SKLHIIDISN  240
TYCTQWPTLL EALATRTDET PHLRLTTVVA TAAGTAAVQK VMKEIGTRME KFARLMGVPF  300
KFNVIHHVGD LSELNFNELD IKDDEALAVN CVGTLHSVGD ISNRRDIVVS AFRRLNPKIV  360
TVVEEEADLD IGVDGVDFVK GFQESLRWFR VYFEALDESF TRTSNERLML ERAAGRALVD  420
LLACPSGESI ERRESAARWS HRLRAAGFSS VAYSDDVSDD VRALLRRYKE GWSMTQSSDA  480
GIFLAWKDQP VVWACAWRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.10.0GRAS family protein