PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA11947.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 285aa MW: 30513.7 Da PI: 5.4842

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA11947.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.1	9.7e-11	172	219	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++YI+sLq OVA11947.1 172 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 219 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MDPSTLINET SFPSANPSSF SLSEIWPFQL PGSSSGVGES SGGLGLRRGQ FGQNLGGFGE 60 IGIGNRDVSV DESTVTEQSG RSGSGGRKKR RDLASVSEDE SKLVSTSSGN EMNDSDGKRP 120 KVSESRNGVS KAEADASSGF GNKPAEQSAQ PSEPPKQDYI HVRARRGQAT DSHSLAERAR 180 REKISERMKI LQDLVPGCNK VIGKALVLDE IINYIQSLQR QVEFLSMKLE AVNSRVTPTI 240 DGFPPKDTFD SAGMTFVSQG ASEFGQGSPP EWLHMQVGGG FERAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59640.1	4e-75	bHLH family protein