PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA12060.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

HB-other

Protein Properties

Length: 362aa MW: 40072.1 Da PI: 7.2001

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA12060.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	18.5	3.4e-06	34	54	36	56
HCTS-HHHHHHHHHHHHHHHH CS Homeobox 36 klgLterqVkvWFqNrRakek 56 k+ ++ +qV +WFqNrR+ +k OVA12060.1 34 KIVVQPKQVWNWFQNRRYAQK 54 566889***********9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MDALLQGANN TIPGRDVVCS IAEKFSASPS RAGKIVVQPK QVWNWFQNRR YAQKAKLIKT 60 PGKLSVSSMP RDDSALNRNL PHCTPLSSGR NHFDNNARVE FEAKSARDGA WYDVATFVSH 120 RMFETGDPEV RVRFAGFGAE EDEWVNVRKH VRPCSVPCEA SECVAVLPGD LILCFQEGKE 180 QALYLDAHVL DAQRWRHDVR GCRCRFLVRY DHDQSEEIVP LRKVCRRPET DYRLQLMYAS 240 KEFASVDLQE MSKDPSLVGT SRDFNSTPVQ KIRKHHKPKG NADEVVTIIT SSSVEEPIIM 300 ETATATTMKA ENCDDNNIGI SDERIVDAAL VVGATTSIGS GSGSGTGNGT GTGTVKKIEE 360 GK

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MDALLQGANN TIPGRDVVCS IAEKFSASPS RAGKIVVQPK QVWNWFQNRR YAQKAKLIKT  60
PGKLSVSSMP RDDSALNRNL PHCTPLSSGR NHFDNNARVE FEAKSARDGA WYDVATFVSH  120
RMFETGDPEV RVRFAGFGAE EDEWVNVRKH VRPCSVPCEA SECVAVLPGD LILCFQEGKE  180
QALYLDAHVL DAQRWRHDVR GCRCRFLVRY DHDQSEEIVP LRKVCRRPET DYRLQLMYAS  240
KEFASVDLQE MSKDPSLVGT SRDFNSTPVQ KIRKHHKPKG NADEVVTIIT SSSVEEPIIM  300
ETATATTMKA ENCDDNNIGI SDERIVDAAL VVGATTSIGS GSGSGTGNGT GTGTVKKIEE  360
GK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.1	1e-117	HB-other family protein